Paracoccus aminovorans: JCM7685_2556
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Entry
JCM7685_2556 CDS
T05468
Symbol
lpd3
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pamn
Paracoccus aminovorans
Pathway
pamn00010
Glycolysis / Gluconeogenesis
pamn00020
Citrate cycle (TCA cycle)
pamn00260
Glycine, serine and threonine metabolism
pamn00280
Valine, leucine and isoleucine degradation
pamn00310
Lysine degradation
pamn00380
Tryptophan metabolism
pamn00620
Pyruvate metabolism
pamn00630
Glyoxylate and dicarboxylate metabolism
pamn00640
Propanoate metabolism
pamn00670
One carbon pool by folate
pamn00785
Lipoic acid metabolism
pamn01100
Metabolic pathways
pamn01110
Biosynthesis of secondary metabolites
pamn01120
Microbial metabolism in diverse environments
pamn01200
Carbon metabolism
pamn01210
2-Oxocarboxylic acid metabolism
pamn01240
Biosynthesis of cofactors
Module
pamn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pamn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pamn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pamn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JCM7685_2556 (lpd3)
00020 Citrate cycle (TCA cycle)
JCM7685_2556 (lpd3)
00620 Pyruvate metabolism
JCM7685_2556 (lpd3)
00630 Glyoxylate and dicarboxylate metabolism
JCM7685_2556 (lpd3)
00640 Propanoate metabolism
JCM7685_2556 (lpd3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JCM7685_2556 (lpd3)
00280 Valine, leucine and isoleucine degradation
JCM7685_2556 (lpd3)
00310 Lysine degradation
JCM7685_2556 (lpd3)
00380 Tryptophan metabolism
JCM7685_2556 (lpd3)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JCM7685_2556 (lpd3)
00670 One carbon pool by folate
JCM7685_2556 (lpd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pamn04147
]
JCM7685_2556 (lpd3)
Enzymes [BR:
pamn01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JCM7685_2556 (lpd3)
Exosome [BR:
pamn04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JCM7685_2556 (lpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_oxidored
FAD_binding_2
GIDA
HI0933_like
DAO
Thi4
Lycopene_cycl
3HCDH_N
Lys_Orn_oxgnase
AlaDh_PNT_C
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
CQR87101
LinkDB
All DBs
Position
I:2590907..2592301
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AA seq
464 aa
AA seq
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MSTYDLIVIGAGPGGYVCAIRAAQLGLKVACVEGRETLGGTCLNVGCIPSKALLHASHML
HETHENFARMGLVNAHVEVDWDKMQGYKAETVGGNTKGIEFLFKKNKIDWLKGWASIEAP
GKVKVGDTTHETKNIVIATGSEPASLKEVEVDNAAGVVVDSTGALALPKIPKSMVVIGAG
VIGLELGSVYARLGAEVTVVEFLDVITPGMDGEVQKQFQKILAKQGLKFVLGAAVSEVEV
ENGLAEVEYTLRKDDSKHEIKAECVLVATGRRPYVAGLGLDAVGVALTDRGFVQVDKNWQ
TNVPGIYAIGDAVPGPMLAHKAEDEGMAVAEVIAGKHGHVNYDVIPGVIYTTPEVASVGL
TEEAARETGRKIKVGKFPFMGNARAKALFQADGFVKLIADADTDRVLGCHIIGPNAGEMI
HEVCVAMEFGASAQDIALTCHAHPTCSEAVREAALACGDGAIHA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctatgacctgatcgtgatcggcgccggccccggcggctatgtctgcgcgatc
cgcgccgcccagctgggcctgaaggtcgcctgcgtcgaggggcgcgagacgctgggcgga
acctgcctgaacgtcggctgcatcccgtccaaggcgctgctgcacgccagccacatgctg
cacgagacgcatgagaacttcgccaggatgggcctggtgaacgcccatgtcgaggtcgat
tgggacaagatgcagggctacaaggccgagacggtcggcggcaacaccaagggcatcgag
ttcctgttcaagaagaacaagatcgactggctgaagggctgggccagcatcgaggcgccc
ggcaaggtcaaggtcggcgacaccacgcatgagacgaagaacatcgtcatcgccaccggc
tcggaacccgccagcctgaaggaggtcgaggtcgacaatgccgccggcgtggtggtcgat
tccaccggcgcgctggcgctgccgaagatcccgaagtcgatggtggtgatcggcgccggc
gtgatcgggctggagctcggctcggtctatgcgcggcttggcgccgaggtgacggtggtc
gaattcctggacgtcatcacccccggcatggacggcgaggtgcagaagcagttccagaag
atcctggccaagcaggggctgaaattcgtccttggtgccgccgtatccgaggtcgaggtc
gaaaacggcctggccgaggtcgaatacacgctgcgcaaggacgacagcaagcacgagatc
aaggccgaatgcgttctggtcgccaccggccgccggccctatgtcgcgggcctcggcctc
gacgcggtgggcgtggcgctgaccgatcgcggcttcgtccaggtggacaagaactggcag
accaatgtccccggcatctacgccatcggcgacgcggtgcccggcccgatgctggcccac
aaggccgaggacgagggcatggcggtcgccgaggtcatcgccggcaagcacggccatgtg
aactacgacgtgatccctggcgtgatctacaccacgcccgaggtcgccagcgtcggcctg
accgaggaagccgccagggaaaccggccgcaagatcaaggtcggcaagttccccttcatg
ggcaatgcccgcgccaaggcgctgttccaggccgacggcttcgtcaagctgatcgccgat
gccgataccgaccgggtgctgggctgccacatcatcggcccgaacgccggcgagatgatc
cacgaggtctgcgtggcgatggaattcggcgcctcggcccaggacatcgccctgacctgc
cacgcgcatccgacctgctcggaagcggtgcgcgaagcggcgctggcctgcggcgacggc
gcgattcacgcctga
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