Paracoccus aminovorans: JCM7685_2608
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Entry
JCM7685_2608 CDS
T05468
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pamn
Paracoccus aminovorans
Pathway
pamn00521
Streptomycin biosynthesis
pamn00523
Polyketide sugar unit biosynthesis
pamn00525
Acarbose and validamycin biosynthesis
pamn00541
Biosynthesis of various nucleotide sugars
pamn01100
Metabolic pathways
pamn01110
Biosynthesis of secondary metabolites
pamn01250
Biosynthesis of nucleotide sugars
Module
pamn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JCM7685_2608 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JCM7685_2608 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JCM7685_2608 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JCM7685_2608 (rfbB)
00525 Acarbose and validamycin biosynthesis
JCM7685_2608 (rfbB)
Enzymes [BR:
pamn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JCM7685_2608 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
adh_short_C2
Sacchrp_dh_NADP
NmrA
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
CQR87152
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All DBs
Position
I:complement(2641656..2642693)
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AA seq
345 aa
AA seq
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MRILVTGGAGFIGSAVVRLAIARGHEVVNLDALTYAANLANVASVADDPRYAFERADIRD
RAALDRILAAHKPDAIMHLAAESHVDRSIDGPGAFIETNVTGTYNLLEAARAYWTAQGRP
DGFRFHHISTDEVFGSLGETGQFTEATPYDPRSPYSASKAASDHLVRAWHETYGLPVVLT
NCSNNYGPFHFPEKLVPVVILNALHARPIPVYGDGGNVRDWLYVEDHADALLLVLEKGAL
GESYNIGGENEARNIDLVRTICAEMDRLRPGSAPHDRLIGFVTDRPGHDRRYAIDPTRIR
TELGWRPSVTVQEGLRRTVEWYLAHEDWWRPLLTRQGVGERLGTA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaggatactggttaccggcggcgcgggattcatcggctcggccgtggtgcggctggcc
atcgcgcgcgggcacgaggtcgtcaacctggacgcgttgacctatgccgccaaccttgcg
aacgtcgcctcggtcgcggacgacccgcgctatgcctttgaacgggccgacatccgcgac
cgcgccgcgctggaccgcatccttgccgcacacaagcctgacgcgatcatgcacctggcc
gccgaaagccatgtcgaccgctcgatcgacgggccgggcgccttcatcgagaccaatgtc
accggcacctacaacctgctcgaggcggcgcgggcctattggaccgcgcagggccggccc
gacgggttccgcttccaccatatctcgactgacgaggtcttcggctcgctgggcgagacc
gggcagttcaccgaagccaccccctatgacccgcgcagcccctattcggcctcgaaagcc
gcctcggaccacctggtccgcgcctggcacgagacctacggcctgccggtggtgctgacc
aattgctccaacaattacgggcccttccatttcccggaaaagctggtgccggtggtgatc
ctgaacgcgttgcacgcccggccgatcccggtctacggcgacggcggcaatgtccgcgac
tggctttatgtcgaggatcacgccgacgcgctgctgctggtgctggaaaagggcgcgctc
ggggaaagctacaacatcggcggcgagaacgaggccaggaacatcgaccttgtccgcacc
atctgcgccgagatggaccggctgcgtcccggttcggcgccgcatgaccggctgatcggc
ttcgtcaccgaccggcccggccacgaccggcgctatgccatcgacccgacccgcatccgc
accgaactgggctggcgcccttcggtcacggtccaggaggggctgcgccgcaccgtcgaa
tggtatctcgcccacgaggactggtggcgcccgctgctgacgcggcagggcgtcggcgaa
cggctgggcacggcgtga
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