Paracoccus aminovorans: JCM7685_3005
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Entry
JCM7685_3005 CDS
T05468
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pamn
Paracoccus aminovorans
Pathway
pamn03030
DNA replication
pamn03430
Mismatch repair
pamn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM7685_3005 (holA)
03430 Mismatch repair
JCM7685_3005 (holA)
03440 Homologous recombination
JCM7685_3005 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamn03032
]
JCM7685_3005 (holA)
03400 DNA repair and recombination proteins [BR:
pamn03400
]
JCM7685_3005 (holA)
Enzymes [BR:
pamn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM7685_3005 (holA)
DNA replication proteins [BR:
pamn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCM7685_3005 (holA)
DNA repair and recombination proteins [BR:
pamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCM7685_3005 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
CQR87545
LinkDB
All DBs
Position
I:3056620..3057648
Genome browser
AA seq
342 aa
AA seq
DB search
MILKGAEIGRYLARPDPTRPALLVYGQDAMRVALKRAEAVKALVGPGAEEEMRLTRIPGA
DLRKDPAALLDAVKAVGFFPGQRVVLVDDTPDAAAPAVASALGEWRAGDAVIVVAAGALG
KSSALRKLFEPHPAAVTAPIYDDPPSEDEIERWLRDAGLREVPRDAMRDLMALSRALDPG
DFRQTVEKIGLYKHGDTSPLTSSEIALLAPATIEAEVDALIDSVAEGRAREFALLMRRIE
GQGTAPVTLCIAALRHFRALHAGASDPGGPGAGFSRLRPPVFGPRRDRMIRQAQDWGMRA
LEDAIHQLIETDLTLRSSSRAPAMAVMERMLLRLCMMPRGGR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgaagggcgccgagatcggacgctacctggcgcggcccgatccgacgcggccg
gcgctgctggtctatggccaggacgccatgcgcgtcgcgctgaagcgggccgaggcggtc
aaggccctggtcggccccggcgccgaggaggagatgcgcctgacccgcatccccggggcc
gatctgcgcaaggacccggcggcgctgttggacgcagtgaaggcggtcggcttctttccg
ggccagcgcgtggtgctcgtcgatgacacgcctgacgcggcagcgccggcggtggcctcg
gcgctgggggaatggcgcgcgggcgatgcggtgatcgtggtggcggcgggggccttgggg
aaatcctcggcgctgcggaagcttttcgagccgcatccggcggcggtgaccgcgccgatc
tatgacgatccgcccagcgaggacgagatcgagcgctggctgcgcgacgcgggcctgcgc
gaggtgccccgcgacgccatgcgcgacctgatggcgctgtcgcgcgcgctggaccccggc
gatttccgccagacggtcgagaagatcgggctttacaagcatggcgacacgagcccgctg
acctcctccgagatcgcgctgctggcccccgccaccatcgaggccgaggtggacgcgctg
atcgacagcgtggccgagggccgggcgcgggaattcgcgctgctgatgcgccggatcgag
ggtcaaggcacggcgccggtgacgctgtgcatcgcggctctgcggcatttccgggcgctg
catgccggcgcctcggaccccggtgggccgggggcggggttttcgcggctgcggccgccg
gtctttggcccgcgtcgggaccggatgatccggcaggcgcaggactggggcatgcgggcg
ctggaggacgcgatccaccagttgatcgagacggacctgacgctgcggtcgtcctcgcgc
gcaccggccatggcggtgatggagcggatgctcttgcggctgtgcatgatgccgcgcggc
gggcgctga
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