Paracoccus aminovorans: pAMV1p0066
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Entry
pAMV1p0066 CDS
T05468
Name
(GenBank) outer membrane autotransporter barrel domain protein
Organism
pamn
Paracoccus aminovorans
Brite
Glycosaminoglycan binding proteins [BR:
pamn00536
]
Heparan sulfate / Heparin
Microbial pathogens
pAMV1p0066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bactofilin
Nepo_coat
Motif
Other DBs
NCBI-ProteinID:
CQR83854
LinkDB
All DBs
Position
II:73793..79987
Genome browser
AA seq
2064 aa
AA seq
DB search
MRRFARSRLFATTALISLAGVPMLPGGARADMTLDVDRLGMGWSSSSPIWLDEDGDHGAL
PGTETGIIEGDADETHQLRIYGTVMAGELRLSGGNFRLYGNTLSAGSTTLRLAAENGLLF
TIDSAIDGDLEIQGQGEVSLSRHHAGAVAVAESATLRLRWNATATGDLINEGLVFHNGAR
TGNIVNNGTLGLGGVLEGTLTNNSYLGLYGQVRGLLDNHGNTQIVGDSAVRDLTNHLDAG
VVVRQGNRLDVTNNVANQGSIELLGELRGNVDNAASATLTMVGGTLDGDVANAGTLRGSG
TVSGEIRNTGRVLTGGDLTVGTLINDNRVTVNAGDRLRSTDGPLVNNSQLGVNGRLEGGL
DNAASGTVTMGANGAIAGGVTNAGGMAIAGQVAGVFDNSGSVTTAGDVRVDQFTTTYGGS
MTIGAGHTMTAAQRLVNRGNATINGTLDGNMLNGVGGTTALDGGTVTGSLQNNGILNANG
TVGGALVNSRTLNLTGDLAVGRLENGGTADVGAGEQLTAEERIDNSGALNVAGTVTVNGA
AGIQNDAGGTVTLDGAQVNANLTNLGTLLVNSSSQVNGDLTNRNQLTLDGSAGDVTLTVD
GIFTNSGRLDGTNTSGNPSAMTIVADLFANEGGVMNNVNVIGDLLNRTTLTYDQDSFLDG
NLTNDTSGDVTVSAALDVRGHDIGNRGDFHITTDADSSGALNNVGALTNEGDFTIDAGTS
ATAQRVANRDDGVMTVAGTLTSATAVENEATLNVSGQVAADLDNSGTTVLSGGTLAGSVT
NSGGLQGNGTVTGAVANSGTLAMTGQVAGTVANTGTINQSGTLTVAGLTNDEIVDIAAGG
VLRSTATVQNNDRIAVAGQLDAALQNNAPGRLTLNGGTVTGAVANAGEITGSGTISGALT
NSGTATLGGRLAAGATNAAGGRLVSQGTLSTASLTNAGRVEVASGSTLQSDTAVRNANQL
LVAGRLEGGLDNTGTTTLSGGTVAGAVTSAGRLTGSGTIDGTLANAGTASLGGRVTGSVT
NTGTLTSSGTLRVGGLVNDEVLDVAAGSTLQGDGTIVNNDRATLAGRIEGTLTNAGKTTL
EGGTLAGRLANSGLLTGTGTIEGTLANAGNVVIAGRVDRLENTGSLGLRGDLRVGALVND
ALAVVASGQRLTTDSALLNNAGRLVIAGTLAGDLDNRDSASITLDGGVVEGNIANAGTLN
GGGRVTGQLVNTGTITTRRDLSIGQLINRDLISIDERRGVLRSDSTVQNEARLALAGRLE
ADLLNRASGRVALDRGRVNGDIGNLGTLTGQGSIAGTLENQGIVTLGGSVDSLRNFEGGT
LAVDGRLAVHEFLNAGTAAIGAGTRLNMADPDGAPAAAQNLETGDLQVDGMLGGALVNAG
TLRGTGTITGGVLNTGSANWAGRIGGTVTNRADLTLAGGGTIAGGLINESGDFVSRGTAA
VEGGLRNESGATARLVAGSRLVAAGGVLNRAGGRFFLNGVLQGDMENRGALSQAGTLEGS
LLSNGQTVLGGTVTGDLIYDGGTLELRDGARIGRDFRLNTDYALGAGSQVTAGRTVVTQG
TTLALAGMLDGAMLNHGRVDVAGDQARVTGTVTNNGTVDMGDGRTSGVLRVGGLEGEGTY
RLDLNLRTMTADRITVLGGAARGIYHLEFDLADRDTLPQRGARVTLIDVDESFGSQNDFR
YTRSDLPAGSERIVYSVQRADPNNGTGDLELVSQLNPAMGAIFGNVALVQSLIGSVVNRP
TSPFVTSLAYDDPEKPCGIGSWGRVIGGHANASGKTDNGVSNVETEVHADYYGVQVGTDL
ACFDDRFGGWNMAFGALGGINRGSTSQPVYAIDPRNALDLTSILTSYTSTDFEQRYAGIY
ATATKGRFQADLQYRLERTDFTISNDPLPGYTGLGLDETDFSSDAQTLSGSISYGIPIGD
SGWAVLPTMGFAWSKLSTDSIRFDEDYTLVFKDSTRKIGFAGATLAKTFVDNGRNSALYA
FATGTWYKDFADPTISLFASEENTETLTTENLGSYGEISVGANWIKVLGPKARGRQVSTG
ARIDARFGDQLDSVGVSGQFRWQF
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtttcgccagatcccgccttttcgccaccaccgcgctgatctcgctggcgggt
gtgccgatgctgcccggcggggccagggccgacatgaccctggacgtcgaccgtctcggc
atgggctggtcctcgtcgagtcccatctggctggacgaggacggcgatcacggcgcgctg
cccgggaccgagaccgggatcatcgagggcgacgcggatgagacgcatcagcttcgcatc
tacggcaccgtcatggcgggcgaattgaggctgagcggcggcaatttccggctctatgga
aacacgctgagcgccggatccacgacgctgcggctggcggccgaaaacgggctgctgttc
accatcgactcggccatcgacggcgatctcgaaatccaggggcagggcgaggtctcgctg
tcgcgccatcacgccggcgccgtcgcagtcgccgaaagcgccacgctgcggctgcgctgg
aacgccaccgcgacgggcgacctgatcaatgaggggttggtgttccacaacggcgcccgg
accggcaatatcgtcaacaacgggacgctcggccttggcggtgtgctggaaggcaccttg
accaacaacagctacctgggcttgtacggtcaggtgcggggtctgcttgacaaccacgga
aacacccagatcgtgggggacagcgccgtgcgcgacctcaccaaccatcttgatgccggt
gttgtggtgcggcagggcaataggctggacgtcaccaacaatgtggcaaaccagggcagc
atcgaactcttgggcgagctgcgcggaaacgtggacaacgccgccagtgccaccctgacc
atggtcggcggcacgctggacggcgacgtcgcgaacgcgggcacgcttcggggcagcggc
acggtctcgggcgagatccggaacaccggccgcgtcctcaccggcggcgatctgaccgtc
ggcacgctgatcaacgacaaccgggtcacggtgaatgccggcgaccggctgcgcagcacc
gacggcccgctggtgaacaacagccagctgggcgtgaacggccggctcgagggcgggctg
gacaacgcggccagcggcacagtgacgatgggggcgaacggcgccatcgcgggcggtgtc
accaacgccggcggcatggcgatcgccgggcaggtcgcgggcgtcttcgacaacagcggg
tccgtcaccacggcgggcgacgtgcgcgtggaccagttcaccaccacctatggcggcagc
atgaccatcggcgccggccataccatgaccgccgcgcagcggctggtgaaccgcggcaat
gccaccatcaacggcacgctggacggcaacatgctcaacggtgtcggcggcaccaccgcc
ctggacggcggcaccgtcaccggctcgctgcagaacaacggcatcctgaacgccaacggc
accgtgggcggtgcgctggtcaacagccgcacgctgaacctgaccggagacctggcggtc
ggccggctggagaacggcggcaccgccgatgtcggcgccggcgaacagctgaccgcggaa
gagcggatcgacaacagcggtgcgctgaacgtcgccgggacggtgacggtgaacggcgcg
gcgggcatccagaacgatgccggcggcacggtgacgctggacggggcccaggtgaacgcc
aacctgaccaatctcggcaccttgctggtcaattcctcgtcgcaggtgaacggagacctg
accaaccgcaaccagctgacgctcgacggcagtgccggcgacgtgacgctgaccgtggac
ggcatcttcaccaactcgggccggctggacggcaccaataccagcggcaacccctcggcc
atgaccatcgtcgccgatctgttcgccaacgagggcggcgtgatgaacaacgtcaacgtg
atcggcgacctgctgaaccgcacgacgctgacctatgaccaggattccttcctggacggc
aacctgaccaacgacaccagcggcgatgtgacggtctcggccgcgctggacgtgcgcggg
cacgacatcggcaaccgcggcgatttccacatcaccaccgacgccgattccagcggggcg
ctgaacaatgtcggcgcgctgaccaacgagggcgacttcaccatcgacgccggcacctcg
gccacggcgcagcgcgtggcgaaccgggacgacggcgtgatgaccgtcgccggcaccctg
acctcggccaccgcggtcgagaacgaggcgacgctgaacgtctcgggccaggtggcggcg
gatctggacaattcgggcaccacggtgctgtcgggcggcacgctggccgggtcggtgacc
aacagcggcgggttgcagggcaacggcaccgtcaccggcgcggtggcgaacagcggcacc
ctggcgatgaccgggcaggtggcggggacggtcgccaataccggcaccatcaaccagagc
ggcacgctgaccgtggccgggctgaccaatgacgagatcgtcgacatcgccgcgggcggc
gtgctgcgctcgaccgcgacggtgcagaacaacgaccgcatcgcggtcgcgggccagctg
gacgccgcgcttcagaacaatgcgccggggcggctgacgctgaacggcggcacggtgacc
ggcgcggtcgccaatgccggagagatcaccggcagcggcaccatctcgggcgcgctgacc
aacagcggcaccgccacgctgggcggccggctggcggcgggcgcgaccaatgccgccggc
gggcggctggtgtcgcagggcacgctcagcaccgcctcgctgacgaacgcgggccgggtc
gaggtcgcctcgggcagcaccctgcaatcggatacggcggtgcggaacgccaaccagctt
ctggtcgccggccggctggagggcgggctggacaacaccggcaccaccaccctgtcgggc
ggcaccgtcgccggcgcggtcaccagcgccggccggctgaccggcagcggcaccatcgac
ggcacgcttgcgaacgccggcaccgccagcctgggcggccgggtgacgggcagcgtcacc
aacacgggcacgctgaccagcagcggcaccctgcgcgtgggcgggctggtcaacgacgag
gtgctggacgtggcggcgggcagcacgctgcaaggcgacggcaccatcgtcaacaacgac
cgcgcgacgctggccgggcggatcgagggcacgctgaccaatgccggcaagaccacgctg
gagggcggcacgctggcgggacggctggcgaacagcggcctgctgaccgggaccggcacc
atcgagggcaccctggccaatgccggcaatgtggtcatcgccggccgggtcgaccggctg
gagaacaccggctcgctgggtctgcggggcgatttgcgcgtcggcgcgctggtcaatgac
gcgctggcggtcgtcgcctcgggccaacggctgaccacggacagcgccctgctcaacaac
gccggccgcctagtcatcgcgggcacgctggcgggcgatctggacaaccgcgactcggcc
agcatcacgctggacggcggggtggtcgagggcaacatcgccaatgccggcacgctgaac
ggcggcggccgggtgaccgggcaactggtcaataccggcaccatcactacccgccgcgac
ctgagcatcggccagctcatcaaccgcgatctgatcagcatcgacgaaaggagaggcgtg
ctgcgctcggactcgaccgtgcagaacgaggcgcggctggcgcttgccggccgtctggag
gccgatctgctgaaccgcgcctcgggccgggtcgcgctggaccgcggccgggtgaacggc
gatatcggcaacctcggcacgctgaccgggcaaggcagtatcgccggcacgctggagaac
cagggcatcgtcaccttgggcggcagcgtcgactcgctgcgcaacttcgaaggcggcacg
ctggccgtggacggcaggctggcggtgcatgagttcctgaacgccggcaccgccgccatc
ggcgccgggacccggctgaacatggccgatcccgacggcgccccggccgccgcgcagaac
ctggaaaccggcgacctgcaggtggatggcatgctgggcggtgcgctggtcaatgccggc
acgctgcgcgggaccgggaccatcacgggcggcgtcctgaacaccggcagcgccaactgg
gcgggccgcatcggcggcaccgtcaccaaccgcgccgacctgacgctggcgggcggcggc
accatcgccggcgggctgatcaacgaatcgggcgatttcgtcagccgcggcaccgccgcg
gtcgagggcgggctgcgcaacgaatccggcgccaccgcccggctggtggccggcagccgg
cttgtcgcggccggcggcgttctgaaccgggcggggggccgcttcttcctgaacggcgtg
ctgcaaggcgacatggaaaaccgtggcgccctgagccaggcgggaacgctggaaggctcg
ctgctgagcaacgggcaaacggtgctgggcgggaccgtgaccggcgacctgatctatgac
ggcggcacgctggagctgcgcgacggcgcccgcatcggccgggatttccggttgaacacc
gattatgcgctgggtgccggcagccaggttacggccggccgcaccgtggtgacccagggc
accaccctggccctggccggcatgctggacggcgcgatgctgaaccacggccgggtcgat
gtcgcgggcgaccaggcccgggtcaccggcaccgtcaccaacaacggcaccgtggacatg
ggcgacggccgcacctcgggcgtgctgcgcgtgggcggtcttgaaggcgagggcacctat
cggctggacctgaacctgcgcaccatgaccgcggaccgcatcacggtgctgggcggcgcg
gcgcgcggcatctatcatctggagttcgacctggccgaccgcgacaccctgccccagcgc
ggggcgcgggtgacgctgatcgacgtggacgaaagcttcggcagccagaacgatttccgc
tatacccgcagcgatctgccggccgggtccgaacgcatcgtctattcggtccagcgcgcc
gatcccaacaacggcaccggcgacctggaactggtcagccagctgaacccggccatgggc
gcgatcttcggcaacgtggcgctggtgcagtcgctgatcggctcggtggtgaaccgtccg
accagccccttcgtcacctcgctggcctatgacgacccggaaaagccctgcggcatcggc
agctggggccgcgtcatcggcggtcatgccaatgccagcggcaagaccgacaacggcgtc
agcaatgtcgagaccgaggtccatgccgattactacggcgtccaggtcggcaccgacctg
gcctgtttcgacgaccgtttcggcggctggaacatggccttcggggcgctggggggcatc
aaccgcggctcgaccagccagccggtctatgccatcgaccccaggaacgcgctggacctg
acctcgatcctgacctcctacacctcgaccgatttcgagcagcgctacgccggcatctat
gccaccgccaccaagggccggttccaggccgacctgcaataccggctggagcggacggat
ttcaccatctcgaacgacccgctgcccggctataccgggctgggcctggacgagaccgat
ttctccagcgacgcgcagacgctcagcggttcgatcagctacggcatcccgatcggcgac
agcggttgggcggtcttgccgaccatgggcttcgcctggtccaagctgtccacggattcg
atccgcttcgacgaggattataccctggtcttcaaggacagcacgcgcaagatcggcttc
gccggcgccaccctggccaagacctttgtcgacaacggacgcaattcggcgctctacgcc
tttgcgaccggcacctggtacaaggatttcgccgatccgacgatctcgctcttcgcctcc
gaggaaaacaccgagacgctgaccaccgagaacctgggctcctacggcgagatcagcgtc
ggcgcgaactggatcaaggtgctgggaccgaaagcgcgcgggcgccaggtcagcaccggc
gcgcggatcgacgcccgtttcggcgaccagctggacagcgtgggcgtctcgggtcagttc
cgctggcaattctga
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