Profundibacter amoris: BAR1_00020
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Entry
BAR1_00020 CDS
T06831
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pamo
Profundibacter amoris
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pamo03032
]
BAR1_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
pamo03400
]
BAR1_00020 (gyrB)
Enzymes [BR:
pamo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BAR1_00020 (gyrB)
DNA replication proteins [BR:
pamo03032
]
Prokaryotic type
DNA Topoisomerases
BAR1_00020 (gyrB)
DNA repair and recombination proteins [BR:
pamo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BAR1_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_insert
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AXX96455
UniProt:
A0A347UC77
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All DBs
Position
3737..6154
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AA seq
805 aa
AA seq
DB search
MADDNKNPEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVTVIIHADSSVSVSDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDSNSYKISGG
LHGVGVSVVNALSEWLELRIWRDGKEHVARFEHGDTVESLKVVGECGDRTGTEVRFMAST
ETFSNLDYNFHTLENRLRELAFLNSGVRIILTDERPAEPLKSDLFYEGGVREFVRYLDRS
KSGMLPDPIFFKGEKDGITVEVAMWWNDSYHENVLPFTNNIPQRDGGTHMAGFRGALTRT
INSYAQSSGIAKREKISFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESL
VNEKLAEWFEENPNEAKMIVSKIVEAAHAREAARKARELTRRKTAMDVNFLAGKLKDCSE
KDPSKTEIFLVEGDSAGGSAQTGRDRQTQAILPLKGKILNVERARFDRMLASQEIGNLVM
ALGTGIGRDEFDISKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGYLYIAQP
PLYKVSRGKSEVYLKDQASLEDYLIEMGVDGATLRLESGEEITGQDLIRVINEARQVRRI
LEAFPTLYPRHILEQTAIAGGFVAGQADADLQGVADAVATRLDLIAEEYERGWQGRPTQD
HGIRLTRMLRGVDEVRTLDGRVLRSGEARKLGSMTDALQEVYSKPARLIRKDREVPIFGP
VDLLDAILAEGEKGLSLQRYKGLGEMNPDQLWETTLDPEARVLLQVKIDDVAEADDLFTK
LMGDVVEPRREFIQQNALNVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacaataagaatcccgaagaatatggtgcggattctatcaaggttctcaaa
gggttagaagcggttcgcaaacgcccggggatgtatatcggggataccgatgatggctcg
ggtctgcaccatatggtgtacgaagtcgtggacaacggtattgacgaggctttggcgggt
cacgccgacgccgtaaccgtcatcatccacgcggattccagcgtatcggtcagcgataac
ggccgcgggattccggtgggaattcacgaagaagaaggcgtatcggcggccgaggttatc
atgacccagttgcacgccggtggtaaattcgacagcaattcctacaaaatatcgggcggt
ttgcacggggttggtgtttcggtggtgaatgccctgtccgagtggctggaattgcgcatc
tggcgtgatggcaaggaacatgttgcacggtttgagcatggtgacacggttgaatcgcta
aaggtggttggtgaatgcggtgaccgtactggcaccgaggtgcggttcatggcctcgacc
gaaacattttccaatctggactataatttccacacgctggaaaaccgtctgcgcgaactg
gcgttcctgaattccggcgttcggatcatcctgaccgatgagcgccccgccgaaccgcta
aagagcgatctgttttacgagggtggcgtgcgcgaattcgtgcgctatctggaccggtcc
aaatccggcatgctgcctgatccgatttttttcaaaggggaaaaggacggtatcaccgtc
gaggtcgcaatgtggtggaacgacagctaccacgaaaatgtgctgccctttaccaacaac
atcccgcagcgcgatggcggcacccatatggcgggttttcgcggcgcgctgacacgcacg
atcaacagctacgctcagtccagcggtatcgccaagcgtgaaaagatcagctttaccggt
gatgatgctcgcgaagggctgacctgtgtgttgtcggttaaagtgcccgaccccaagttt
tccagccagaccaaggataaactggtgtcttccgaggtccgacctgttgtcgaaagcctt
gtaaacgaaaagctggctgagtggttcgaggaaaacccgaacgaagccaagatgatcgta
agcaagattgtcgaagccgcccatgcccgcgaggcggcccgcaaagcccgcgaactgacc
cgccgcaaaaccgcgatggacgtgaatttccttgctggcaagctgaaggattgttcggaa
aaggacccctccaagaccgaaatctttctggtggaaggggacagcgccggcgggtcggcg
caaaccggacgtgaccggcagacacaggccatcctgccgctaaagggtaaaatcctgaat
gtcgagcgggcgcggttcgaccgcatgttggcgtcacaggaaatcggcaatctggtgatg
gcgctgggcaccggtattggccgcgatgaattcgacatctcaaaattgcgctaccacaag
atcgtgatcatgaccgatgccgatgtggacggcgcgcatatccgcaccctgctgctgacg
tttttcttccggcaaatgcccgaactgatcgagggcggctatctctatatcgcgcaaccg
ccgctgtataaggtcagccgtggcaaatccgaggtctatctgaaagatcaggcctcgctt
gaggattacctgatcgaaatgggtgttgatggcgccaccttgcggctggagtcgggcgag
gaaatcaccggtcaggacttgatccgtgtgatcaacgaggcccgtcaggtgcgccgtatt
ctggaagcctttccgacgctttacccacgtcacattctggaacagacggcgattgccggt
ggctttgtcgcagggcaggccgacgccgatctgcaaggcgtggccgatgcggttgccacc
cgtctggatctgatcgccgaagaatacgaacgaggctggcagggacgcccgacgcaggat
cacggcatccgtctgacccgcatgttgcgcggtgtggacgaggtgcgcacattggatggc
cgcgtgctgcgctcgggcgaggcgcgcaagctggggtcgatgaccgatgcgctgcaagag
gtctattccaaacctgcccgcctgatccgcaaggatcgcgaagtgccgattttcggccct
gtggacctgctggatgccattctggccgagggtgaaaagggtctgtccttgcaacgctac
aagggtctgggcgaaatgaatcccgatcagctgtgggaaaccacgctggaccccgaagcg
cgggtgctgttgcaggttaagatcgacgatgtggccgaggccgacgatctgttcaccaaa
ctgatgggcgatgtggtcgagccacggcgcgaattcatccagcaaaacgcgctgaatgtg
gaaaatctggatttctag
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