Profundibacter amoris: BAR1_00690
Help
Entry
BAR1_00690 CDS
T06831
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pamo
Profundibacter amoris
Pathway
pamo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BAR1_00690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamo03021
]
BAR1_00690
03400 DNA repair and recombination proteins [BR:
pamo03400
]
BAR1_00690
Enzymes [BR:
pamo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BAR1_00690
Transcription machinery [BR:
pamo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BAR1_00690
DNA repair and recombination proteins [BR:
pamo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BAR1_00690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RepD-like_N
IDH
Motif
Other DBs
NCBI-ProteinID:
AXX96581
UniProt:
A0A347UCK3
LinkDB
All DBs
Position
140548..141564
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPTQLVVTPGANPATQATVVAEPLERGFGLTMGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSTVAGVREDVTDIVLNLKGVAMSMEVEGPKRLSISAKGPMVVTAGDISE
SAGIEILNKDHVICQLDDGADLFMELTVNTGKGYVAADKNRPEDAPIGLLPIDAIYSPVK
KVAYDVQPTREGQVLDYDKLTLKLETDGSITPEDAVAFAARILQDQLSIFVNFDEPEAAN
RQEEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGSKS
LNEIKEVLSGMGLHLGMDVEDWPPENIEDLAKKFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaaaaactggcaagaactgattaaaccaacgcaattggtggtgacaccgggc
gcgaaccctgcaacgcaggccacggttgtggccgaaccgctggaacgcggctttggtctg
actatgggcaacgcgctgcgtcgcgtgctgatgtcgagccttcagggcgccgccatcacc
agcgtccagattgacaatgtattgcatgaattttcgaccgttgcaggcgtgcgtgaagac
gtcaccgacatcgtgttgaacctgaaaggcgttgccatgtcgatggaagtcgaagggccc
aagcgcctgtcgatttcggccaaaggcccgatggttgtcaccgctggtgacatctcggaa
agtgcgggcattgaaatcctgaacaaagaccacgttatctgtcagctggacgatggcgcc
gatctgttcatggaactgaccgtcaacaccggcaaaggctatgtcgctgccgataaaaat
cgccccgaagacgcacccatcggcctgttgccgattgatgcgatctactcgccagtgaaa
aaggttgcctatgacgttcagccgacccgtgaaggtcaggttctggactatgacaaactg
acgttgaaactggaaacggacggatcaatcacacccgaagatgccgtggcttttgccgcg
cgtatccttcaggaccagctgtcgattttcgtgaacttcgacgagccagaagccgccaac
cgtcaggaagaagacgacggtctggaattcaacccgctgctgctgaagaaagtagacgag
ttggaactatcggtccgttcggcaaactgcctgaagaacgacaacatcgtttacatcggc
gatctgatccagaaaaccgaagcagaaatgctgcgcaccccgaactttggcagcaaatct
ttgaacgagatcaaagaagtgctgtcgggcatgggtctgcatctgggtatggacgtcgaa
gattggccaccagagaacatcgaagatctggcgaagaaattcgaagaccagttctag
DBGET
integrated database retrieval system
