KEGG   Profundibacter amoris: BAR1_03110
Entry
BAR1_03110        CDS       T06831                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
pamo  Profundibacter amoris
Pathway
pamo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pamo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BAR1_03110 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pamo03400]
    BAR1_03110 (uvrB)
DNA repair and recombination proteins [BR:pamo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BAR1_03110 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BAR1_03110 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_19 AAA_22 UB2H Kinesin DUF87 AAA Microtub_bd
Other DBs
NCBI-ProteinID: AXX97006
UniProt: A0A347UDS8
LinkDB
Position
complement(634307..636442)
AA seq 711 aa
MQQNTPEPRKKLEGGKRFVMHTEFEPAGDQPTAIKELSAGINAGERNQVLLGATGTGKTF
TMAKVIEETQRPAIILAPNKTLAAQLYGEMKGFFPENSVEYFVSFYDYYQPEAYVPRTDT
FIEKDSAINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSPETYTAMTQDLVTGEEY
DQREIMQGLIAQQYKRNDNAFARGTFRVRGDSLEIWPSHLEDRGWRLSFFGDELEGITEF
DTLTGAKTATLDKVRVYANSHYVTPRPTLLQAIKHIKEELRVRLDHFNAEGKLLEAQRLE
QRTRFDLEMLEASGFCAGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESHVSVPQI
GGMYKGDYRRKFTLSEHGFRLPSCMDNRPLKFEEWDAMRAQSIFVSATPQNWELEQSGGV
FVEQVIRPTGLLEPVIEIRPVEMQVDDLLDEVRKVAAKGMRTLVTTLTKRMAEDLTEYLH
EQGIRVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEG
FLRSETSLVQTIGRAARNVEGRVIMYADRITGSMERAMKETERRRARQIAYNKEHGITPA
TVKKNIGDVLSGLYDGDTDLARVTATVDKPMIGENLATHLEALRGDMRKAAENLEFEEAA
RLRDEVRRLEAVELAVKDDPLARQSAVEAASAAGGRSTAGKAGSSRKWGKR
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgcagcaaaacaccccggaaccgcgcaagaaactcgaaggtggcaaacgctttgtcatg
cacaccgagtttgaaccggcaggcgatcagcccaccgcgatcaaggagttgagcgcgggc
atcaatgccggcgagcgcaatcaggtgctgctgggcgcaaccggcaccggcaagacattc
accatggccaaggtaatcgaggaaacccagcgccccgcgatcatccttgcacccaacaaa
acccttgcggcgcagttgtatggcgaaatgaaggggttcttccccgaaaactcggtcgaa
tatttcgtgtccttctatgactactaccagcccgaggcctatgtgccccgcaccgatacc
ttcatcgaaaaagacagcgccattaatgaacaaatcgaccggatgcgccattccgccacc
cgcgccctgctggaacgcgatgatgtgatcattgtggcatcggtgtcctgcatctatggc
atcggctcgccggaaacctataccgcgatgacgcaggatctggtcaccggcgaagaatac
gaccagcgcgagatcatgcaggggctgattgcccagcaatacaaacgcaacgacaacgcc
tttgcccgcggcacattccgcgtgcgcggcgacagccttgaaatctggcccagccacctt
gaggatcgcggctggcggctgtccttctttggggacgagttggaagggatcaccgaattc
gacacattgaccggtgccaaaaccgccacgctggacaaggtgcgggtttacgccaattcg
cattacgtcaccccgcgcccgacccttttgcaggccatcaaacacatcaaggaagaactg
cgcgtgcggctggaccacttcaacgccgagggcaaactgctggaagcgcagcggttggag
caacgcacgcggttcgatctggaaatgctggaggcctcgggcttttgcgccggtatcgag
aactattcccgctacctgaccggccgcgccccgggcgaaccgccccccaccctgtttgaa
tacatccccgacaacgcgattgtctttgccgatgaatcccacgtttccgtgccgcaaatc
ggcggcatgtacaaaggcgactaccgacgcaaattcaccctgtccgagcacggttttcgc
ctgccgtcctgcatggacaaccggcccctgaagttcgaggaatgggatgcgatgcgcgca
caatccatcttcgtctctgccaccccgcaaaactgggagctggagcaatcgggcggcgtg
tttgtcgaacaggtgatccgccccaccggcctgctggaaccggtgatcgaaatccgccct
gtcgaaatgcaggtcgacgatctgctggacgaggtgcgcaaagtcgcggccaagggcatg
cgcacgctggtcaccaccctgaccaaacgtatggccgaagacctgaccgaatacctgcac
gaacagggcatccgcgtgcgttacatgcacagcgacatcgacacgctggaacgcatcgaa
atcctgcgcgacctgcggctgggggcgttcgacgtgctggtcggcatcaacctgctgcgc
gaggggctggacattccagaatgcggtctggtcgccattctggacgccgacaaagagggc
ttcctgcgctcggaaacctcgctggtgcagaccatcgggcgggcggcgcgtaatgtcgag
ggccgcgtgatcatgtatgccgaccggatcaccggcagtatggagcgcgcgatgaaagaa
accgaacgccgccgcgcccgccagatcgcctataacaaagaacacggcatcacgccggca
acggtgaaaaagaacatcggcgacgtgttgtcggggctatatgacggcgacacggatctg
gcgcgcgtcaccgccaccgtggacaaaccgatgatcggcgaaaatctggcaacccatctg
gaagcgctgcgcggcgacatgcgcaaagccgccgaaaatctggagttcgaagaagccgcc
cgcctgcgtgacgaagtgcggcgactggaagcggtggaactggcagtcaaggacgacccg
ctggcgcggcaatcggcggtcgaggctgcaagcgcggcaggggggcggtcaacggcgggc
aaggcggggtcaagccggaagtgggggaagaggtag

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