Profundibacter amoris: BAR1_03110
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Entry
BAR1_03110 CDS
T06831
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pamo
Profundibacter amoris
Pathway
pamo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BAR1_03110 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamo03400
]
BAR1_03110 (uvrB)
DNA repair and recombination proteins [BR:
pamo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BAR1_03110 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BAR1_03110 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
UB2H
Kinesin
DUF87
AAA
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AXX97006
UniProt:
A0A347UDS8
LinkDB
All DBs
Position
complement(634307..636442)
Genome browser
AA seq
711 aa
AA seq
DB search
MQQNTPEPRKKLEGGKRFVMHTEFEPAGDQPTAIKELSAGINAGERNQVLLGATGTGKTF
TMAKVIEETQRPAIILAPNKTLAAQLYGEMKGFFPENSVEYFVSFYDYYQPEAYVPRTDT
FIEKDSAINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSPETYTAMTQDLVTGEEY
DQREIMQGLIAQQYKRNDNAFARGTFRVRGDSLEIWPSHLEDRGWRLSFFGDELEGITEF
DTLTGAKTATLDKVRVYANSHYVTPRPTLLQAIKHIKEELRVRLDHFNAEGKLLEAQRLE
QRTRFDLEMLEASGFCAGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESHVSVPQI
GGMYKGDYRRKFTLSEHGFRLPSCMDNRPLKFEEWDAMRAQSIFVSATPQNWELEQSGGV
FVEQVIRPTGLLEPVIEIRPVEMQVDDLLDEVRKVAAKGMRTLVTTLTKRMAEDLTEYLH
EQGIRVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEG
FLRSETSLVQTIGRAARNVEGRVIMYADRITGSMERAMKETERRRARQIAYNKEHGITPA
TVKKNIGDVLSGLYDGDTDLARVTATVDKPMIGENLATHLEALRGDMRKAAENLEFEEAA
RLRDEVRRLEAVELAVKDDPLARQSAVEAASAAGGRSTAGKAGSSRKWGKR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaaacaccccggaaccgcgcaagaaactcgaaggtggcaaacgctttgtcatg
cacaccgagtttgaaccggcaggcgatcagcccaccgcgatcaaggagttgagcgcgggc
atcaatgccggcgagcgcaatcaggtgctgctgggcgcaaccggcaccggcaagacattc
accatggccaaggtaatcgaggaaacccagcgccccgcgatcatccttgcacccaacaaa
acccttgcggcgcagttgtatggcgaaatgaaggggttcttccccgaaaactcggtcgaa
tatttcgtgtccttctatgactactaccagcccgaggcctatgtgccccgcaccgatacc
ttcatcgaaaaagacagcgccattaatgaacaaatcgaccggatgcgccattccgccacc
cgcgccctgctggaacgcgatgatgtgatcattgtggcatcggtgtcctgcatctatggc
atcggctcgccggaaacctataccgcgatgacgcaggatctggtcaccggcgaagaatac
gaccagcgcgagatcatgcaggggctgattgcccagcaatacaaacgcaacgacaacgcc
tttgcccgcggcacattccgcgtgcgcggcgacagccttgaaatctggcccagccacctt
gaggatcgcggctggcggctgtccttctttggggacgagttggaagggatcaccgaattc
gacacattgaccggtgccaaaaccgccacgctggacaaggtgcgggtttacgccaattcg
cattacgtcaccccgcgcccgacccttttgcaggccatcaaacacatcaaggaagaactg
cgcgtgcggctggaccacttcaacgccgagggcaaactgctggaagcgcagcggttggag
caacgcacgcggttcgatctggaaatgctggaggcctcgggcttttgcgccggtatcgag
aactattcccgctacctgaccggccgcgccccgggcgaaccgccccccaccctgtttgaa
tacatccccgacaacgcgattgtctttgccgatgaatcccacgtttccgtgccgcaaatc
ggcggcatgtacaaaggcgactaccgacgcaaattcaccctgtccgagcacggttttcgc
ctgccgtcctgcatggacaaccggcccctgaagttcgaggaatgggatgcgatgcgcgca
caatccatcttcgtctctgccaccccgcaaaactgggagctggagcaatcgggcggcgtg
tttgtcgaacaggtgatccgccccaccggcctgctggaaccggtgatcgaaatccgccct
gtcgaaatgcaggtcgacgatctgctggacgaggtgcgcaaagtcgcggccaagggcatg
cgcacgctggtcaccaccctgaccaaacgtatggccgaagacctgaccgaatacctgcac
gaacagggcatccgcgtgcgttacatgcacagcgacatcgacacgctggaacgcatcgaa
atcctgcgcgacctgcggctgggggcgttcgacgtgctggtcggcatcaacctgctgcgc
gaggggctggacattccagaatgcggtctggtcgccattctggacgccgacaaagagggc
ttcctgcgctcggaaacctcgctggtgcagaccatcgggcgggcggcgcgtaatgtcgag
ggccgcgtgatcatgtatgccgaccggatcaccggcagtatggagcgcgcgatgaaagaa
accgaacgccgccgcgcccgccagatcgcctataacaaagaacacggcatcacgccggca
acggtgaaaaagaacatcggcgacgtgttgtcggggctatatgacggcgacacggatctg
gcgcgcgtcaccgccaccgtggacaaaccgatgatcggcgaaaatctggcaacccatctg
gaagcgctgcgcggcgacatgcgcaaagccgccgaaaatctggagttcgaagaagccgcc
cgcctgcgtgacgaagtgcggcgactggaagcggtggaactggcagtcaaggacgacccg
ctggcgcggcaatcggcggtcgaggctgcaagcgcggcaggggggcggtcaacggcgggc
aaggcggggtcaagccggaagtgggggaagaggtag
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