Profundibacter amoris: BAR1_04170
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Entry
BAR1_04170 CDS
T06831
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pamo
Profundibacter amoris
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamo03000
]
BAR1_04170
Transcription factors [BR:
pamo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BAR1_04170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_28
HTH_24
Rib_5-P_isom_A
HTH_5
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AXX97198
UniProt:
A0A347UEC0
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Position
841003..841926
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AA seq
307 aa
AA seq
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MPKLDAVTFKQLRAIRAVAEHGTLSAAAEAVGLTPPAIHTQLRILEENLGCKLVDRGGAQ
GARLTAEGQAVLDAEVTIRIALENCMQKVRALRDGQSGVVVLGVVSTGKYFAPGLVAMLQ
QHYPDINVVLRVGNRDAILRALQQQSIDLAIMGRPPRAPVVETVVIGDHPHVMIAAPEHP
LAGRRDISAQELLAQTFIAREEGSGTRIMMIRYLDRIGEGTPYRSIEMGTNETIKQAVIA
GLGVALISQHTVTEELRSGRLMTIESAGLPIARKWFLLHRQDLRVTPAIATVHGFISDLK
GSFLPKL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctggatgcggttactttcaaacagttacgcgccatacgcgctgtggctgag
cacggaactttatcggcggcggccgaagcggtggggctgacgccgcccgcaattcatacg
caattgcgaatcctcgaggaaaatctgggttgcaagctggtggatcggggcggggcgcag
ggggcgcggttgacggccgaaggccaggcggtgctggatgccgaggtgacgatccggatt
gccttggaaaactgcatgcagaaggtgcgggcgctgcgggacgggcagagcggggttgtg
gtgctgggggtggtttccaccggcaagtatttcgcgccgggtctggtggcaatgttgcag
cagcattaccctgacatcaatgttgttctgcgggtgggcaaccgtgatgcgatattgcgg
gccttgcaacagcagtcgattgatctggcgatcatgggccgcccgccacgcgcacctgtg
gttgaaaccgtagtgatcggcgatcatccgcatgtgatgattgccgcgcccgaacacccg
ctggccggacgacgggatatatcggcgcaggaattgctggcgcaaaccttcatcgcccgc
gaggaagggtcgggcacgcggatcatgatgatccgttatctggaccgcatcggcgaaggc
acaccctaccgcagcattgaaatgggcaccaatgaaaccatcaaacaggcggtgattgcg
gggttgggtgtggcgctgatttcacagcataccgtgaccgaggaattgcgctcggggcgt
ttgatgacaattgaatccgccggcctgccgattgcccgcaaatggtttttgctgcaccgg
caggatctgcgggtgacccccgcgattgccacggtgcacgggttcatttccgatctgaag
gggtcgtttttgccaaagctttag
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