Profundibacter amoris: BAR1_05010
Help
Entry
BAR1_05010 CDS
T06831
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pamo
Profundibacter amoris
Pathway
pamo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAR1_05010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pamo03019
]
BAR1_05010
03009 Ribosome biogenesis [BR:
pamo03009
]
BAR1_05010
Enzymes [BR:
pamo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BAR1_05010
Messenger RNA biogenesis [BR:
pamo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BAR1_05010
Ribosome biogenesis [BR:
pamo03009
]
Prokaryotic type
rRNA helicases
BAR1_05010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXX99700
UniProt:
A0A347ULH2
LinkDB
All DBs
Position
complement(1003699..1005870)
Genome browser
AA seq
723 aa
AA seq
DB search
MTEVSDLITPLARALTRKGYETLTPVQQAMSDPDLVGRDALVSAQTGSGKTVAFGIAMAT
TLLDGDENFGRAGAPKALIIAPTRELALQVMRELQWLYAETGARFGSCVGGMDARTERRT
LDRGVHIVVGTPGRLRDHLTRGALDLSDCACVVLDEADEMLDLGFREDLEFILDEAPKTR
RTLLFSATVSRPIAVLAKTYQHDAVRIETKGDTKQHSDIEYRALVVKPADRENAIINLLR
YYEAQNALVFCATRAAVNHMTAKFNNRGMSVVALSGELSQNERTHALQSMRDGRARVCIA
TDVAARGIDLPGLDLVIHADLPQNKEALLHRSGRTGRAGSKGVSALIVPMSQRKKAERLL
GWAKVTAKWDTPPTAKQVEERDNERLLAGFKVSDEVDQEFVAKLLAAHTPEQIAAAYITQ
YRDQRSAPEELQTVSVTGPDVRSPRDEFAESTWISLTIGRNQKAEPRWLLPMLCRAGDIT
KRDIGAIRMQPDETFVQLNAQIANDFMKALGGKKELEEGIKVTVLDTPPDLGPQPRGKPQ
GGKKRPYKRREGGDDRPAYKGKKEWDSDRDGGKPAYKGKGDRDGGKPAYKGKVDRDGGKP
AYKGKKKWDSDDNDSPRTPYKGKSKWDTGGDKPAAKGKPKSAPKYDSKPRHKEAPKSDFA
PKFGGEADATPKRKGGGKPRPKNLGANDRGGARKPRHKDSGKGKFAKPSGKKKTSKPMGK
KRT
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaagtatccgacctgataaccccgctggcccgcgccctgacgcgcaaaggctat
gaaacactgacccctgtgcaacaggcgatgtcggaccctgatcttgtggggcgcgatgca
ttggtatcggcgcagaccggttcaggtaaaaccgtggccttcgggatcgcgatggccacc
acgctgctggacggcgacgaaaactttggccgcgccggtgcccccaaggcgctgatcatc
gcgccaacccgcgaactggccttgcaggtgatgcgcgaattgcagtggctgtacgccgaa
accggcgcgcgattcgggtcctgcgttggcggcatggatgcgcgcaccgaacggcgcacg
ctggatcgcggggtccacatcgttgtcggcacaccgggccgtctgcgcgatcacctgaca
cgcggcgcgctggatctgtcggattgcgcctgtgtggtgctggacgaagccgacgaaatg
cttgatctgggctttcgcgaggatctggaattcattctggacgaagcgcccaagacccgc
cgcaccctgctgttttccgccacggtttcacgcccgattgcggtgctggccaagacctat
cagcatgacgccgtgcggatcgaaaccaaaggcgacaccaagcagcatagcgatatcgaa
taccgcgcgcttgtggtgaaaccggcagaccgtgaaaacgcgattatcaatctgttgcgc
tattacgaggcacaaaatgcgctggtattttgcgcgacccgcgccgccgtgaatcatatg
accgcgaaattcaacaaccgcggcatgtcggtagtggcgctgtcgggcgagctgagccag
aacgaacgcacccacgcgctgcaatccatgcgcgatggacgtgcacgggtctgtatcgcc
accgacgttgccgcacgcgggattgatctgccgggtctggatctggtgatccacgcggac
ctgccgcaaaacaaagaggcgctgttgcaccgttcgggccgcaccggtcgggcggggtcc
aaaggggtttcagccctgatcgtgccgatgagccagcgcaaaaaggccgaacgcctgttg
ggctgggccaaggttacggcgaaatgggacacaccgccgaccgccaaacaggtcgaggaa
cgtgataacgaacgcctgcttgcgggcttcaaggtcagcgacgaggtggatcaggaattc
gtggcaaaactgctggcggcccatacgcccgagcagattgcagcggcctatatcacccag
tatcgcgaccagcggtccgcgccggaggaactgcaaaccgtttcggtcacagggccggac
gtgcgcagcccgcgcgacgaatttgccgaaagcacctggatttccctgaccatcgggcgc
aaccagaaggccgagccacgctggctgttgccaatgctgtgccgcgccggtgacatcacc
aaacgcgacatcggggcgatccggatgcaaccggacgagacattcgtgcagttgaacgcg
cagattgccaatgatttcatgaaggcactgggcggcaagaaagaactggaagaaggcatc
aaggtgacggtgctcgacaccccccctgaccttggcccgcaaccacgcggcaaaccccag
ggcggcaaaaaacgcccctacaagcggcgcgaaggcggggatgaccggcctgcctataaa
ggcaagaaagagtgggacagcgaccgcgatggcggcaagcccgcatacaagggcaagggt
gatcgggacggcggcaaaccagcctataaaggcaaagtggatcgcgatggcggaaaaccg
gcctataagggcaaaaagaaatgggacagcgacgataacgacagcccccgcacaccttac
aagggcaaatccaaatgggatacggggggcgacaaacccgccgccaagggcaagccgaag
tcagccccgaaatacgacagcaaaccccgccacaaagaggcacccaaatctgatttcgcg
ccaaaattcggtggcgaagccgatgcgacgcccaaacgcaaaggcggcggcaagccaaga
cccaagaatctgggcgccaatgatcggggcggggcacgcaaaccgcgtcacaaagacagc
ggcaagggcaagttcgccaaaccatccggcaagaaaaagacgtctaaaccgatgggcaag
aaacggacttag
DBGET
integrated database retrieval system
