Profundibacter amoris: BAR1_06650
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Entry
BAR1_06650 CDS
T06831
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pamo
Profundibacter amoris
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamo03016
]
BAR1_06650 (rnd)
Enzymes [BR:
pamo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BAR1_06650 (rnd)
Transfer RNA biogenesis [BR:
pamo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BAR1_06650 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AXX97637
UniProt:
A0A347UFK9
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All DBs
Position
1330766..1331923
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AA seq
385 aa
AA seq
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MKTLTTTQQLADFCEMAAKHPYVTIDTEFLRERTYYSKLCLIQMAVKGDDKDCAVLVDPL
VNGLSLEPLYELFRNEDVVKVFHAARQDLEIFFIEGGVFPKPLFDTQVAAMVCDFGEQVG
YETLVRKIAKEPLDKSSRFTDWSRRPLTDAQKTYAIGDVTHLRVIYEFLKDKIEKTNRTK
WVEEELKVLLSPETYIIQPENAWKRVKTRSNSGRFMAIVKELAAFRETYAQGRNVPRNRV
YKDEAMLELASTKPKTMQDLGRSRLLQREARKGEIAEGILAAVAKGFETDPADFPKPDKS
REKLQVNPALADLLRVLLKSKAEEAGVALKLIATSAELDRIAAGQRDGKSLSGWRNEVFG
KDALRLCDGEIALTAQGTAVKVVDL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctgaccaccacgcaacagttggccgatttctgcgaaatggccgcgaaacac
ccctatgtgacgatcgacaccgaatttctgcgcgaacgcacctattattccaaactgtgc
ctgatccagatggcggtcaaaggcgatgacaaggactgcgcggttctggttgatccgctg
gttaatgggctgtcgctggagccgctctatgagctgtttcgtaacgaggatgtggtcaag
gtgttccacgccgcccgccaggatctggaaattttctttatcgaaggcggggtgtttccc
aagccgctgttcgacacgcaggtcgccgcgatggtgtgtgatttcggcgagcaggtgggc
tatgaaacactggtgcgcaagattgccaaggaacctctggataaatcgtcccgctttacc
gactggtcgcgccgcccgctgacggatgcgcagaaaacctatgcgattggcgatgtgacc
catttgcgggtgatctacgaattcctgaaagacaagattgaaaaaaccaatagaaccaaa
tgggtagaggaggaacttaaggttcttctaagccctgaaacctatatcatccagccggaa
aatgcgtggaaacgggtgaaaacccgcagcaattcgggccgcttcatggcgattgtcaaa
gagctggcggcgtttcgcgaaacctatgcccaagggcgcaatgtgccgcgcaaccgtgtt
tataaagacgaggcaatgctggaactggcctcgaccaagccaaagaccatgcaggatctg
ggccgttcgcgcctgctgcaacgcgaggcccgcaaaggcgagattgccgaaggtattctg
gccgctgtggccaagggtttcgaaaccgatccggcagatttccccaaacccgacaagtcg
cgtgaaaagctacaggtgaatccggcgttggccgatttgctgcgggtgctgttgaaatcc
aaggccgaagaggccggcgtggcgctgaaactgatcgctacatccgccgaactggaccgg
attgcggcagggcagcgcgacgggaaatcgctgtcgggctggcgtaacgaggtattcggc
aaagacgccttgcgcctgtgtgacggtgaaattgccctgacggcgcagggcacggcagtg
aaggtcgtagacctttag
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