Profundibacter amoris: BAR1_09530
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Entry
BAR1_09530 CDS
T06831
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pamo
Profundibacter amoris
Pathway
pamo02020
Two-component system
pamo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BAR1_09530
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
BAR1_09530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pamo02035
]
BAR1_09530
Bacterial motility proteins [BR:
pamo02035
]
Flagellar system
Chemotaxis proteins
MCPs
BAR1_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
PAS_4
dCache_1
PAS_9
PAS_8
HAMP_2
CHASE4
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
AXX98149
UniProt:
A0A347UH21
LinkDB
All DBs
Position
complement(1908499..1911600)
Genome browser
AA seq
1033 aa
AA seq
DB search
MSLWNNLKLSVKLPLIMLALSAIALLGMGVLAYFSAKESLDQTARSRLQMVLGTRASDIE
KWYEEISTDVVSEASSPATRRAITDFIGAWTALPGDKGAFLQQHYASQDENAESAGQAID
FAGVQTDYSRKHRRHHPFFETLLKRNGFSDIFIVDPQGNVLYSVLKNPDYATNILNGPWK
STGLGNAFRAALPLGVDKTAFVDLAPYEPDNGKYSGFVSAPILSVNGALVGVYIVQITTD
SISSAFRSNDGLGKTGVTMTVGADYHPRISSLAGDGEGLMRVKVDPALVDRALEGESGLA
QSIGIDGDPVLAAYSPLHIGNLTWALIAEQDTKELFAPVVDVRNRMFVQGGILAAISALV
SIFLARNISRPLTGVGGAMQRVAREEYDVDIPATNRGDEIGHIAAILDDFRKALREAKER
TRETLFKGTAFEGTSAGLMIVDQDFTIRFVNSSVMGLFQKYETQFQKVNDAFSAEDVIGY
NMDIFHNMPGRIRELLSDPDNLPFHAEIPVGNARFSLDINAVTDSEGAQLGCVVEWIDVT
TTRMNEAVLNAIEENQAKAEFAPGGALLVANENFLNLTGGLENDQFEKSIHDLVMFDPDM
AEKYGDVWGRVAAGETIVGKFIMNAGGGTEGTLEGAFTPVQSKSGDVIRVLLVGNDVTQA
QLQMEEAEAIRIELEQAQSEVVEALSIGMRQLSEGDLTTEITKKFKPDYESLRADFNGAV
ATLRKAMLRVIDNAGSIRGEASEISNAADDLSRRTERQAATLEETAAALDELTASVRSAA
EGAGLANQVVSDAKSSAEASGVVVQEAVDAMEEIQTSSSKISRIINVIDDIAFQTNLLAL
NAGVEAARAGEAGRGFAVVASEVRALAQRTSDAAREINDLISTSSQHVGRGVDLVGQAGS
ALQQIVESVSNIAVHVSEIAVSANEQSSGLAEINTAVNQLDQVTQQNAAMFEETTAASHS
LTKEAENLSETTAQFRIGEETSNIVSPDFQPSNKQIASETGYPNRAPKPAPENSLATAHA
VDPEITESDWEDF
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtggaataatctgaagctttcggtgaaattgcctttgataatgctggccctt
agtgccattgccctgttgggtatgggggtgctggcctatttcagcgcgaaagaatcgctg
gatcaaaccgcaagatcacgtttgcaaatggttctgggtacgcgggcttcggatatcgaa
aaatggtatgaggaaatatccacagatgttgtgagtgaagccagcagcccggctacccgc
cgcgcaatcaccgatttcatcggcgcatggacagcgctgccaggtgacaagggcgccttt
ttgcaacagcattatgcatcgcaagacgaaaacgccgaatccgcaggtcaggcgattgat
tttgcgggggtgcagacagattattcccgcaaacaccgccgacatcatccgttctttgag
acattattaaaacgcaacgggttttccgatatctttattgtcgatccgcaaggcaacgtt
ctttattccgttttgaaaaatccggattacgccaccaacattctgaatggcccttggaaa
agcacaggattgggcaatgcgttccgcgcagctctgcctttgggtgtggacaagactgct
tttgtcgatcttgcaccttatgaacccgacaacgggaaatattcgggctttgtttcagcg
ccgattctttcggtaaacggggcattggtgggggtctatattgtgcagatcaccacagac
tcgatcagttcggcgtttcgttcgaatgacgggttggggaaaaccggcgtcacaatgacg
gtcggggcggattatcacccgcggatcagttctcttgccggtgatggtgaagggttgatg
cgggtcaaggttgatccggctcttgtggatcgtgcattggagggggaatccggcttggcg
cagagtattggaatcgatggcgatcccgttctggcagcctattcaccccttcatatcggt
aatctgacatgggctttgatagccgaacaagacacgaaagagctgtttgcaccggttgtc
gatgtgcgcaaccggatgtttgtgcagggcgggatactggcggctatctcggcccttgtt
tcgatttttctggcacggaacatttcccgtcctctgaccggtgttggcggggccatgcag
cgggttgcccgggaagagtatgatgtggatattccggcaacaaaccgcggagacgaaatc
gggcacatcgctgcgatccttgatgatttccgcaaagctttgcgcgaagcaaaagaaaga
accagagagaccctgttcaaaggaacggcattcgaggggacatctgcgggattgatgatc
gttgatcaggatttcaccatacggtttgtcaattcttcggtcatgggcctgttccagaaa
tacgagacacaattccagaaggtgaatgatgctttctcggcggaggatgtcatcggttat
aacatggatattttccataatatgccgggccgcattcgcgaactgctgagtgaccctgac
aatttgcctttccacgcggaaatacctgtcggaaatgcacggttctcgctggatataaat
gctgttacagattctgaaggggcgcaacttggatgtgttgtcgagtggattgatgtcaca
acgacccgcatgaacgaagccgttctgaatgcaatcgaggaaaatcaggccaaggcagaa
tttgcaccgggtggcgccttgctggttgcgaatgaaaacttccttaacctcaccggaggg
ttggaaaatgaccagttcgaaaaatccattcatgatctggtaatgtttgaccccgatatg
gccgaaaaatatggcgacgtttggggccgggttgcagcaggtgaaacgattgttggcaag
tttattatgaatgcgggggggggtaccgagggaactctggaaggtgcattcactccggtt
caaagcaaatctggcgatgtaatacgcgtccttctggtggggaatgatgtcacgcaggcc
cagttgcagatggaagaagccgaagccatccgtatcgagttggagcaagcacagtcggag
gtggttgaggccttgagtatcggaatgcgccagctttccgaaggggatctgacgaccgaa
ataaccaagaaattcaagccggattatgaatcattgcgcgcagatttcaatggtgccgtg
gcaacattgcgcaaagcaatgttacgcgtcatcgacaatgccggctcgatccgtggcgag
gcttcggaaatcagcaacgcggcagatgatttgtctcgccgaaccgaacggcaggcggca
acgcttgaagaaacagcggcagcattggatgaattaaccgcaagtgtacggtctgccgcc
gaaggggcaggtctggcaaaccaggttgtttccgatgcaaaatccagtgccgaagcaagt
ggagttgtggttcaggaagcagttgatgcgatggaagagatccagacatcatcaagcaag
atttcacgcattatcaatgtgattgacgacatcgcgtttcagacaaatctgcttgcgttg
aacgcaggggtagaggccgcccgcgctggcgaagcaggccgtggttttgctgtcgtggca
tcagaagtaagggctcttgcccaaagaacatccgatgcggcgcgtgaaataaatgatctt
atctcgacaagcagccagcatgttggccgtggcgttgatcttgttgggcaagcaggttct
gcattgcagcagattgttgaatccgtatcgaatattgcggtccatgtttcggaaattgca
gtatctgccaatgaacaatcctcaggattggccgaaataaacacggctgtaaaccagctg
gatcaggtaacgcaacagaatgctgcgatgtttgaggaaacaaccgccgcaagccattct
ttaaccaaagaggcggaaaacctgtcagaaacgacagcccagttccgtattggggaagaa
acaagcaatattgtcagtccggattttcaaccatccaataaacaaatagcctcggagacg
ggctatccaaaccgcgcacccaaacccgcacctgaaaattctttggccaccgcccatgct
gttgatcccgaaatcacagagagtgattgggaagatttctaa
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