KEGG   Profundibacter amoris: BAR1_10365
Entry
BAR1_10365        CDS       T06831                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pamo  Profundibacter amoris
Pathway
pamo03420  Nucleotide excision repair
pamo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pamo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BAR1_10365
   03430 Mismatch repair
    BAR1_10365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pamo03400]
    BAR1_10365
Enzymes [BR:pamo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BAR1_10365
DNA repair and recombination proteins [BR:pamo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BAR1_10365
   MMR (mismatch excision repair)
    Other MMR factors
     BAR1_10365
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 PcrA_UvrD_tudor AAA_11 DEAD
Other DBs
NCBI-ProteinID: AXX98297
UniProt: A0A347UHG9
LinkDB
Position
complement(2081663..2084008)
AA seq 781 aa
MSHSDDIPAPTGLAARAMAARPAPYLDGLNPEQRRAVEAMDGPVLMLAGAGTGKTKALTA
RIVHLLNTGRARPNEVLAVTFTNKAAREMKDRVGQMLGETVEGMPWLGTFHAICVKILRR
HAELVGLKSNFTILDRDDQIRLLKQLLAAANIDDKRWPARALASVIDGWKNRAWTPDKVP
ASEAGAFNNMGGELYAAYQTRLKTLNAVDFGDLLLHVVTIFQQHTDVLEQYRRWFKYILV
DEYQDTNVAQYLWLRLLAGGHRNICCVGDDDQSIYGWRGAEVGNILRFEADFPGAVVVKL
EQNYRSTRHILGAASGVIAANEGRLGKTLWTEKNEGEKVRLIGHWDGEEEARWIGDEVEA
MQRGTRGQAPVSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAY
FRVTVSPEDDLAFERIVNTPRRGVGDKALQTIQRAARDNGVPLLMATRMLLEAGEIKGKA
KGALQALVGAFARWARVAADENASHVVLAEVILEESGYTDMWLKDKSPEAPGRLENLKEL
VKALEQFENLQGFLEHIALIMDNASEDSEEKLTIMTLHAAKGLEFPAVFLPGWEDGLFPS
QRSMDESGLKGLEEERRLAYVGITRAEELCTISFAANRRVYGQWQSQLPSRFIDELPEEH
VEVLTPPGLYGGGYGAASPSVAMEGKAQRADAYNSPGWRRMQARKAGHGMGQPREASKAV
IDITANAAFSKGERVFHQKFGYGYVMGIEGDKLDIEFERAGAKKIVARFVVPADRADDVP
F
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgagccattctgacgatatccccgccccgaccggccttgccgcccgcgcgatggcggcg
cgccctgcgccctatctggacgggctgaaccccgaacaacgccgcgcggtcgaggcgatg
gacgggccggtcctgatgctggcaggggccggcaccggcaagacaaaggcgctgaccgcg
cggatcgtgcatttgctgaacaccggccgcgcccgcccgaacgaggtgctggccgtgacc
tttaccaacaaggccgcgcgcgagatgaaagaccgcgtggggcagatgctgggcgaaacc
gtggaaggcatgccgtggctcggcaccttccatgcgatttgtgtcaaaatattacgccgc
catgccgaactggtcgggctgaaaagcaatttcaccattctggatagggacgatcagatc
cgcctgctgaaacagctgttagcggcggcgaatatcgacgacaaacgctggcccgcccgc
gcgctggcttcggtgatcgacggctggaagaaccgcgcatggacgccggacaaggtgccg
gcaagcgaggcgggcgcgttcaacaacatggggggcgagctgtatgccgcctatcagacc
cgcctgaaaaccctgaacgcggtggatttcggcgatctgctgttgcatgtggtgacgatt
ttccagcaacacacggatgtgctggaacaataccggcgctggttcaaatatatccttgtg
gacgaatatcaggataccaacgtcgcccaatacctgtggctgcggctgctggcgggcggg
caccggaatatctgctgcgtcggcgatgacgaccagtctatctatggctggcgcggggcc
gaggtgggcaatatcctgcggttcgaggccgatttccccggtgcggtggtggtgaagctg
gagcagaactatcgttcgacccgtcacatccttggcgcggcatctggcgtgattgccgcc
aacgaggggcggctgggcaagacgctgtggaccgagaagaacgagggcgagaaggtgcgg
ctgatcggccattgggacggcgaggaagaggcgcgctggatcggggacgaggtcgaggcg
atgcagcgcggcacccgtgggcaggcgcctgtgtcgctggacgatatggccattctggtg
cgggccagccaccagatgcgcgccttcgaggaccggtttttgaccatcggcctgccgtac
cgcgtgatcggcgggcctcggttttacgagcggatggagatccgcgacgcgatggcctat
ttccgcgttacggttagccccgaggatgatctggcgttcgagcgcattgtcaacacgcca
cggcgcggggtgggggacaaggcattgcaaaccatccagcgggcggcgcgggacaacggt
gtgccgttgctgatggccacgcggatgctgctggaagccggcgagatcaagggcaaggcc
aagggggcgttgcaggcgctggtcggcgcttttgcgcgctgggcgcgggtggctgcggat
gaaaacgccagccatgtggtactggccgaggtgatcctcgaggaaagcggctataccgac
atgtggctgaaggacaaatcgcccgaagccccggggcggctggaaaacctgaaggaactg
gtcaaggcgctggagcagttcgagaacctgcaagggtttctggaacatatcgcgctgatc
atggacaatgcctccgaggattccgaagaaaagctgaccatcatgaccctgcacgcggcc
aaggggctggaatttcccgccgtgttcctgccgggctgggaggacgggctgtttcccagc
cagcgcagcatggatgaaagcggactaaaggggttggaggaagaaaggcggctggcttac
gttggtattacgcgggccgaggagctgtgtacgatttcctttgccgccaaccggcgggtt
tacgggcagtggcaaagccaactgccctcgcggttcattgacgaattgcccgaagaacat
gtcgaggtgctgaccccgccgggcctttatggcggcggatacggggcggcgtcgcccagc
gtggcgatggagggcaaggcgcagcgggcggatgcctataattcaccgggctggcgacgg
atgcaggcgcgcaaggcagggcatggcatggggcaaccgcgcgaggccagtaaagcggtg
atcgacatcacggcaaatgcggcgttttccaagggggaacgggtgttccatcagaaattc
ggctatggctatgtgatggggatcgagggtgacaagctggatatcgaattcgagcgcgcc
ggtgccaaaaagatcgttgcgcgctttgtggtgccggcggatcgggccgatgacgtgccg
ttttga

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