KEGG   Profundibacter amoris: BAR1_16010
Entry
BAR1_16010        CDS       T06831                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pamo  Profundibacter amoris
Pathway
pamo03030  DNA replication
pamo03410  Base excision repair
pamo03420  Nucleotide excision repair
pamo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pamo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BAR1_16010
   03410 Base excision repair
    BAR1_16010
   03420 Nucleotide excision repair
    BAR1_16010
   03440 Homologous recombination
    BAR1_16010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pamo03032]
    BAR1_16010
   03400 DNA repair and recombination proteins [BR:pamo03400]
    BAR1_16010
Enzymes [BR:pamo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BAR1_16010
DNA replication proteins [BR:pamo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BAR1_16010
DNA repair and recombination proteins [BR:pamo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BAR1_16010
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BAR1_16010
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Taq-exonuc DNA_polI_exo1 DUF5393
Other DBs
NCBI-ProteinID: AXX99304
UniProt: A0A347UKC6
LinkDB
Position
complement(3207254..3210043)
AA seq 929 aa
MSFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLYKQIEANKGPDAP
THVAVIFDYSGKTFRNEIYDKYKANRPPPPEDLRPQFPLTRDATRAFNIACHEVEGFEAD
DIIATLSRQAREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKRIDADGVREKFGVGPER
VVDVQALAGDSVDNIPGAPGIGIKTAALLINEYGDLENLLEHAEEIKQPKRRQALIENAD
LIRLSKQLVTLVDDMDLDFTLDDLELKAPEPEPLLSFLTEMEFRTLTKRIADQMGVEPPA
IEVSAAPVDTPDAPPFNAGKYEWVKDVDALTKWIERIYERGYVAVDTETTGLDTMRVDLV
GISLSVEAGEACYIPLRHKESAGDDLFASDALAEGQMNFDVALTMLKPMLQDESILKIGQ
NMKYDAKIFARVGVDVAPIDDTMLLSYALHAGLHNHGMDALSERYLDHSPIPIKPLLGAG
KSAITFDKVKVADAVPYAAEDADITLRLWQMFKPRLHVEQVTTVYETMERPLVPVLAQME
MNGIKVDRDVLSRMSNNFAQKMAALEAEIHELAGRSFNVGSPKQLGEILFDEMGLEGGKK
GKTGAYATGADVLEDLAAEGNELAARVLDWRQLSKLKSTYTDALQDHINPDTGRVHTSYV
IAGANTGRLASTDPNLQNIPVRTEEGRKIREAFVADEGKVLLSLDYSQIELRILAHIADI
DALKQAFRDGLDIHAMTASEMFDVPLDEMTPDIRRKAKAINFGVIYGISGFGLARNLRIP
RKEAQGFIDRYFERFPGIRTYMDTTVEYAKEHKYVKTLFGRKIHTPEMGSKGPRAGFAKR
AAINAPIQGSAADIIRRAMVRMPEAIYGMPAKMLLQVHDELIFEVEEGAVDAVTKVVRDV
MEGASMPAVKLDVPLIVDAGVGVNWAEAH
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgagttttggcaaaggctgccatctacacctgatcgacggctcggcctttattttccgt
gcctatcacgcattgcccccgttgacgcgcaaatccgatggtctgccgattggcgcggtc
gcggggttttgcaacatgctgtacaagcagatcgaggccaacaaggggccggatgcgccc
acccatgttgcggtgatctttgactattccggcaagacgtttcgtaatgaaatctacgat
aaatacaaggccaaccgcccgcccccgcccgaagacctgcgcccgcaattccccctgacc
cgcgacgccacccgcgccttcaacattgcctgtcacgaggtcgaggggttcgaggcagat
gacatcatcgccacactgtccagacaggcccgagaggcaggcgggcgctgcaccatcatc
agttcggacaaggatttgatgcagcttgtcggcggtggcgttgaaatgctggacgcaatg
aagaacaagcggatagacgcggacggtgtgcgcgaaaaattcggcgtcgggccggagcga
gtggtcgatgtgcaggcgctggcgggggatagtgtcgataacatccccggtgcgcccggg
atcggtatcaaaacggcggcgttgctgataaacgaatatggcgatctggaaaatctgctg
gaacatgccgaagaaatcaaacagcccaaacgccggcaggcgctgatcgaaaacgccgat
ctgatccgcctgtcaaagcagttggtgacactggttgacgatatggatctggatttcacg
ctggatgatctggagctgaaagcgccggagccggaacctttgctgtcgtttctgacggaa
atggaatttcgcaccctgaccaaacggatcgctgatcaaatgggggtcgagccgcccgcg
atagaggtgtccgcggcccctgtggacacccccgacgccccgccgtttaacgccggaaaa
tacgaatgggtcaaggatgtggatgccctgaccaaatggatcgagcggatttacgaacgt
ggctatgtggcggtggataccgaaaccacggggctggacaccatgcgggttgatctggtc
gggatttcgctgtcggtcgaggcaggcgaggcctgttatatccctctgcgccacaaggaa
agtgcaggggatgatttgtttgcctcggatgcgctggccgaggggcagatgaatttcgat
gtggccctgactatgctgaagccgatgcttcaggatgaaagcatcctgaaaatcggccag
aacatgaaatatgatgccaagattttcgcccgtgtcggtgtggatgtggccccgattgat
gataccatgttgctgtcctatgccctgcacgcaggattgcacaaccacggcatggatgcg
ctgtcggaacgttatctggaccacagcccgatcccgatcaaaccgctgctgggcgcgggt
aaatccgcgatcacgttcgataaggtcaaggtggccgatgccgtgccctatgccgccgaa
gacgccgatatcaccctgcgtctgtggcagatgttcaaaccgcgcctgcatgtggaacag
gtgaccacggtttacgaaaccatggaacgcccgctggtgccggttctggcgcagatggag
atgaacggcatcaaggtggaccgcgatgttcttagccggatgtcgaacaatttcgcccag
aaaatggcggcactcgaggcggaaatccatgaacttgcgggacggtccttcaatgttggc
tcgcccaaacagttgggtgaaatcctgtttgacgaaatggggcttgaggggggcaaaaaa
ggcaaaacgggcgcttatgccaccggtgccgatgtgctcgaggatctggccgccgagggt
aacgaactggcagcacgggtgctggactggcgccagcttagcaagttgaaatcgacctat
accgatgcgcttcaggatcacataaaccccgatacggggcgtgtgcatacgtcctatgtg
attgcgggggcgaacacggggcggttggcctcgaccgatccgaatttgcagaacattccg
gtgcgcaccgaagaagggcgcaaaatccgcgaggcctttgtggcggacgaaggcaaggtt
ttgctgtcgctggattacagccagatcgaactgcggatactggcgcatatcgccgacatt
gacgcgctgaaacaggcgtttcgcgacggactggacattcacgcgatgaccgcaagcgag
atgttcgatgtgccgctggacgaaatgacgcccgacattcgccgcaaggccaaggcgatc
aatttcggggtgatctatggtatctcgggctttggtctggcccgcaacctgcggattccg
cgcaaagaggcgcaggggtttattgatcgctactttgaacgcttccccggtatccgtacc
tatatggatacaacggtggaatacgccaaagagcataaatatgtgaaaaccctgttcggg
cgcaaaatccacacgccggaaatggggtcgaaaggcccgcgcgccggttttgccaaacgc
gcggcgatcaatgcgccgatacaggggtcggccgccgacatcatccgccgtgcgatggtg
cggatgccagaggcgatttacggcatgcccgccaagatgctgctacaggtccacgatgaa
ctgatcttcgaggtagaagagggggctgtggacgctgtgaccaaagtggtgcgtgacgtg
atggaaggggcatctatgcccgccgtcaaactggatgtgccactgattgtggacgcgggc
gtcggggtcaactgggccgaggcgcattag

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