Profundibacter amoris: BAR1_16280
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Entry
BAR1_16280 CDS
T06831
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pamo
Profundibacter amoris
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BAR1_16280 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pamo03019
]
BAR1_16280 (rnc)
03009 Ribosome biogenesis [BR:
pamo03009
]
BAR1_16280 (rnc)
03036 Chromosome and associated proteins [BR:
pamo03036
]
BAR1_16280 (rnc)
Enzymes [BR:
pamo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BAR1_16280 (rnc)
Messenger RNA biogenesis [BR:
pamo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAR1_16280 (rnc)
Ribosome biogenesis [BR:
pamo03009
]
Eukaryotic type
90S particles
RNase
BAR1_16280 (rnc)
Prokaryotic type
rRNA processing factors
BAR1_16280 (rnc)
Chromosome and associated proteins [BR:
pamo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BAR1_16280 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
PALP
Motif
Other DBs
NCBI-ProteinID:
AXX99353
UniProt:
A0A347UKH5
LinkDB
All DBs
Position
complement(3252048..3252734)
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AA seq
228 aa
AA seq
DB search
MKLSSELKAFAGRIGYTFKRPELLHRAVTHSSMSSPTRDDNQRLEFLGDRVLGLVMAEAL
FMADTAATEGQLAPRFNALVRKETCADVAREFDLGAVLKLGRSEMLSGGRRKEALLADAM
EAVIAAVYLDGGFEAAKALVLRLWGKRVTAVDADARDAKTALQEWAQARKLPPPKYVVVE
RTGPDHAPVFTIEARLENGESQSATANSKRQAEQAAAKLLLARLEGTT
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactctcgtccgaattaaaggcctttgcgggccggatcggttacacgttcaagcgg
cccgagcttttgcatcgggccgttacccattcgtcgatgtcatcccccacccgcgacgac
aaccagcggctggaatttctgggtgaccgtgtgctgggtctggtgatggccgaggccctg
ttcatggcggacacagccgccaccgagggtcagttggccccgcgattcaacgcgctggtg
cgcaaggaaacctgcgccgatgtggcgcgggaattcgatctgggggcggtgctgaaactg
ggccgctcggaaatgctgtccggtggccgccgcaaagaggcgctgctggccgacgccatg
gaagcggtgatcgcagccgtttatctggacggcggattcgaggcggccaaggcgctggtg
ctgcgcctgtggggcaagcgggttacggccgtggacgccgacgcgcgcgacgccaaaacc
gccttgcaggaatgggcgcaggcccgcaaattgcccccaccgaaatatgtggtggtggaa
cgcacagggccggaccacgcaccggtcttcaccatcgaggcgcggctggaaaacggcgaa
agccaatccgccacggcaaattcaaaacgacaggccgaacaggctgcggccaagctgcta
ctggcccgattggaaggtacaacatga
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