Profundibacter amoris: BAR1_17455
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Entry
BAR1_17455 CDS
T06831
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pamo
Profundibacter amoris
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamo03400
]
BAR1_17455 (addA)
Enzymes [BR:
pamo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAR1_17455 (addA)
DNA repair and recombination proteins [BR:
pamo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BAR1_17455 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_30
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXX99559
UniProt:
A0A347UL31
LinkDB
All DBs
Position
complement(3488512..3491868)
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AA seq
1118 aa
AA seq
DB search
MTRRDEATERQVQAAAPTSSTWLSANAGSGKTRVLTDRVARLLLEGVSPQHILCLTYTKA
AASEMQNRLFKRLGAWAMQNGKTLAKELHELGIERRIDADELNNARTLFARAIETPGGLK
IQTIHSFCASILRRFPLEAGVSPQFIEMDDRAAKLLRAEIVEEMADGPDVDAIDALAAHY
SDSDFERLTGEVAKHAARFSTPKDKAEVWQMFGLKPDVTEQDILSDVVLGSEADLFAALM
PALQAGSANDVKAHAKLAALDPANIGFADLEILESVFLTGPKTKQPFSAKIDSFPTKATQ
KTLGAHLDDLNNLMARVETAREARLSLYSAQKTLALHQFATVFLPRYEQQKQLRGWLDFD
DLINLTAKLLHDPQVASWVLYRLDGGIDHILVDEAQDTSPQQWDVIERLAQEFTSGEGAM
PDRLRTIFVVGDRKQSIYSFQGADPEEFGRMRLEFGARLEAANLPFQSLQLEYSFRSAEP
IMRLVDCTLQDHAGQGLGDSIRHRAFKTGMPGRVDLWPVIPKTEAPEQKDWHDPTDKIAK
NHETILLANRIADRIAEMCNGAVIPQDVDNTGTYKMRPVTEGDFLILVQRRSALFHEIIR
ACKSRNLAIAGADRLKIGGELAVKDLTALLAFLATPEDDLSLAAALRSPLFGWGEQELFN
LAHKRPAKTFLWSALRNVRDTYPYTMAMLDALRKDADFQRPYELLERILTRFHGRNNLLA
RLGDEAEDGIDALLTQAMNYERMDVPSLTGFITWLQAEEVEIKRQMDDESNRIRVMTVHG
AKGLEAPIVILPDTVGRGSAPRDELYLTDSNDVMWKVKADASPKVMNTARERLKLSQEQE
RLRLLYVAMTRAEKWLIVCGAGDPGKDGKSWHAMIEAGMKTAGAVPHGDWQRLEYGDWGG
EVKANKPDEKSDVTLPDWAKTDAEIPDRPAQTLSPSQLGGAKVLLGDGDGLSEDAAKQRG
SDIHLLLEHLPAHPQTEWSDIAAMLLPDAAPDILAEVTALLTNPDLAFLFDDSTLAEVPI
TANLPDLGGKRIYGEIDRLVVSPEKILAVDFKSNAIVPENPDGIPDGLLRQMGAYQAALG
MVYPDHKIETAILWTRTGVLMYLEHKAVTAALRATTIP
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccgcgatgaagccaccgaacggcaggtgcaagccgccgcgcccacgtcctcg
acctggttatcggccaacgcggggtcgggcaaaacacgggtgctgaccgaccgggtggcg
cggttgctgctggaaggggtgtcgccgcaacacatcctgtgcctgacctacaccaaagcc
gccgccagcgagatgcagaaccgcctgttcaaacggctgggcgcttgggcaatgcagaac
ggaaaaacactggctaaagaactgcacgagttggggatcgagcggcgcattgatgcggac
gagttgaacaacgcccgcaccctgtttgcccgcgcaatcgaaacgccgggcgggttgaag
atacaaacgatccattcattctgtgcctcgatcctgcggcgttttccgctcgaggcgggc
gtgtctccgcaatttatcgaaatggacgaccgcgcggcaaaactgttgcgcgccgagatt
gtcgaggaaatggccgacgggccggatgttgacgcgatagacgcactggcagcgcattat
tcggacagcgattttgagcggctgaccggcgaggtggcaaaacacgcggcgcggttttcg
acaccaaaggacaaggccgaagtctggcagatgttcgggctgaaacccgatgtgaccgaa
caggacattctgtcggatgtcgttctgggcagcgaggcggatttgtttgccgccctgatg
cccgcactacaggccggttccgccaatgatgtcaaagcccacgccaaactggccgcgctg
gaccccgccaatatcggttttgccgatctggaaatactggaatcggtgttcctgaccggc
cccaaaaccaaacaacccttcagcgccaaaatagacagtttcccgaccaaggccacgcaa
aagacattgggtgcacatctggatgacctgaacaacctgatggcgcgggtggaaacagca
cgcgaggccagactcagtctctattctgcccagaaaacccttgctctacaccaattcgcc
actgtcttcctgccccgttacgagcagcagaaacagttgcgcggctggctggattttgac
gacctgatcaatctgacagccaaactgctgcatgatccgcaggttgcctcatgggtgctt
taccggctggatggcggcattgaccatatccttgtggacgaagcacaggacaccagtccg
cagcaatgggacgtgatcgaacggctggcgcaggagtttacctcgggcgagggggcgatg
cccgacaggctgcgcacgattttcgtagtcggagatcgcaaacagtcgatctattcattt
cagggggccgaccccgaggaattcggccggatgcggctggagtttggggccagattagag
gccgcaaatctgccattccagtcgctgcaactggaatattcctttcgctcggccgaacca
atcatgcggctggtggattgcacgcttcaggaccacgcaggtcagggtctgggcgacagt
atcaggcaccgcgcctttaaaaccggcatgcccggacgggtggatctgtggccggtcatc
ccgaaaaccgaagcgccggaacaaaaggactggcatgatccgaccgacaagattgccaag
aatcacgaaaccattctgctggccaaccggatcgccgacaggattgccgaaatgtgcaac
ggcgcggtgattccgcaagatgtggacaacaccggcacctataaaatgcgccccgtgacc
gagggtgatttcctgattttggtgcagcgccgctcggccctgtttcacgaaatcatccgc
gcctgcaaatcccgcaatctggcgattgccggcgcggaccgtttgaaaatcggcggtgaa
ctggcggtgaaggatctgaccgcgcttcttgcatttctggccacgcccgaagatgatctg
tcgcttgccgccgctctgcgctcgcccctgtttggctggggcgaacaggagctgttcaat
ctggcgcataagcggcctgcaaaaacctttctctggtcggctttgcgcaacgttagagac
acatacccctacacaatggccatgctggacgccctgcgcaaggacgccgatttccagcgc
ccctatgagttgctggaacgtatcctgacccgttttcacgggcgtaataacctgttggcg
cggctgggggacgaagccgaggacggcattgacgcgctgctgacccaggcgatgaattac
gagcggatggatgtgcccagcctgacggggttcatcacatggcttcaggccgaagaggtc
gagatcaaacgccagatggacgacgaaagcaaccggatcagggtgatgacggtgcatggc
gccaaggggctggaagcgccgatcgtgattttgcccgataccgttggccgtggtagtgcg
ccgcgggatgaattgtatctgaccgacagcaatgatgtgatgtggaaggtcaaagcggat
gccagccccaaggtaatgaacactgcgcgtgaacggttgaagctatcacaggaacaggaa
cgcttgcggctgctatatgttgccatgacgcgggcggaaaagtggctgatcgtttgcggc
gcgggcgatccggggaaagatggcaaaagctggcatgcgatgatcgaagcggggatgaaa
accgctggcgcggttccgcatggtgattggcagcggctggaatatggcgattggggcggc
gaggttaaggccaacaagccggatgaaaaatccgacgtcaccttgccggactgggccaaa
acggatgccgaaatccccgaccggcccgcacaaacgctgtcgccatcacaactgggcggg
gccaaggtgctgttgggggatggcgacgggttaagcgaggatgcggccaagcaacggggc
agcgatattcacctattgctggaacacctgcccgcccatccgcaaaccgaatggtcggat
attgccgccatgctgttgcccgatgcggcacccgatattctggccgaagtcaccgccctt
ctgaccaaccccgatctggcctttctgtttgacgatagcacgctggccgaggtaccgatc
acagccaacctgcctgatctgggcggcaagcggatatatggcgagattgaccggttggtt
gtttcaccggaaaaaattctggccgtcgatttcaaatccaacgccattgtgcctgaaaat
ccagacggtattccagacggtttattgcggcaaatgggggcctatcaggccgcattaggg
atggtttaccccgaccataaaatcgaaaccgctatcctgtggactcgcacgggagtcctt
atgtatctggagcacaaggccgttactgcggcattgcgcgccaccacgataccttga
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