Profundibacter amoris: BAR1_17460
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Entry
BAR1_17460 CDS
T06831
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pamo
Profundibacter amoris
Brite
KEGG Orthology (KO) [BR:
pamo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamo03400
]
BAR1_17460 (addB)
Enzymes [BR:
pamo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BAR1_17460 (addB)
DNA repair and recombination proteins [BR:
pamo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BAR1_17460 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXX99560
UniProt:
A0A347UL32
LinkDB
All DBs
Position
complement(3491865..3494810)
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AA seq
981 aa
AA seq
DB search
MFEPTGTLRVFGLPPGADFPKALIDGVLERCKTRPPEFLATVEIYVNTRRMQRRIREIFD
AGPARLLPRVRLITDLGQITALTGLPPAVPKLQRRLELAQLVAKLVEKQPDLAPRASVYD
LADSLASLMDEMQSEGVPPEVIETLDISDQSGHWERALRFVRLTQVYFGETANEHPDSEA
RQRLVVERITEKWVSNPPQNPIIIAGSTGSRGATHMLMQAVAKLPQGALVLPGYDFDLPD
HVWAAMDDAMSAADHPQFRFRALQNSLGIDSSDIAEWTKTTPPSAARNRLVSLALRPAPV
TDQWMAEGPELTDLQTACENMTLVQAPSARIEALTIALKLRQAAETGQTAALITPDRTLT
RQVTAALDQWGIEPDDSAGLPLPMSAPGRFLLHIAGLFGQVLTSETLLTLLKHPLTHSGK
AGRGDHLRWTRDLELHIRKNGPPFPTKDSLSAWANAQADDGRREWAAWLGDLLDGLETVT
ARPLTDHLEHHLALARTLAAGPDDTGSGELWEKPAGQKALEQVSELQRCAGHGGVLAPFD
YNTLFRNLLNQAEVHDPTRPHPNIMIWGTLEARVQGADLVILGGLNDGIWPAAPNPDPWM
NRAMRQKAGLLLPERQIGLSAHDFQQAIGAKEVWLTRALRDAEAQTVPSRWLNRLTNLLG
GLKETGGADALKTMQARGDGWLGMVAEMERISVSKPPEKRPSPIPPTSAQPKSLSVTGIT
KLIRDPYAVYAGKVLRIYPLDPIRQQPDAPLAGTVVHKILERFIKERTEETRDQAKARLM
QIADEVLATDAPWPAARRVWRAKLARVADWFLQGEEDRAKLAKVFKLEQTGAAKVGTLDF
TLTARADRLDRSDDGLTYIYDYKTGKPPTKKQQIEFDKQMLLTAAMVERAGFKGLADTRV
GGAAFIGLGASPEVVPAPLDETDLNTIWAELETLISTYTAGEKGYTSRRAMEKTSYSYDY
DHLARYGEWDESDTPEQEALT
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacccaccggcacccttcgcgtattcggcctgcccccgggcgcggatttccca
aaggccctgatcgacggcgtgctggagcgttgcaaaacccgcccgcccgaatttctggca
acggtggaaatctacgtcaacacccgccgtatgcaacgtcgcatccgcgagattttcgac
gctggccccgcccgcctgttaccacgcgtgcgcctgatcaccgaccttggccagatcacc
gccctgaccggcctgccccccgcagttcccaaactgcaacggcggctggaactggcgcaa
ctggtcgccaaactggtggaaaaacaacccgacctggccccgcgtgcctcggtctatgat
ctggccgacagccttgccagcctgatggacgaaatgcaaagcgaaggcgtgccgcccgaa
gtgatcgaaaccctcgatatttccgatcaatccggccattgggaacgggccttgcggttt
gtcagactcacacaggtctatttcggcgaaaccgccaatgaacaccccgacagcgaagcg
cggcaacggttggtggtggaaaggataacggaaaaatgggtctctaacccgccacaaaac
ccgattatcatcgccggttcaaccggttcacgcggagccacgcatatgttgatgcaggcg
gttgccaaactgccccaaggggcgctggttctacccggatacgactttgatctgcccgat
catgtgtgggcggcgatggatgacgcgatgagtgctgcggatcatccgcaattccgtttc
cgcgccttgcagaattcgctggggatcgacagcagcgatattgccgaatggaccaaaacc
acaccgcccagcgccgcgcgaaaccggctggtttcccttgccctgcgcccggcccctgtg
accgatcaatggatggccgaaggacctgaactgaccgatctgcaaacagcttgcgaaaac
atgacgctggttcaggccccctcggcgcggatcgaggcgctgacgattgcgctgaaactg
cggcaggccgccgaaaccggccagacggctgccctgatcacccccgaccgtaccctgacc
cgacaggtcaccgccgcgctggaccaatgggggatcgagccggacgacagtgccggattg
cccctgcccatgtccgcgccggggcggttcctgctgcatatcgcggggttgttcggacag
gtgctgacctcggaaaccctgctgacgctgttgaaacatccgttgacccattcgggcaag
gcggggcggggcgaccacttgcgctggacccgcgatctggagctgcacatccgcaaaaac
ggcccgcccttcccgaccaaagacagcctgagcgcctgggccaacgcgcaggccgatgac
ggcagacgcgaatgggcggcctggctgggcgatttgctggacgggctggaaaccgtcacc
gcccgcccgttaaccgaccatctggaacaccaccttgcccttgcccgcacgctggccgcc
ggccccgacgataccggcagcggcgagttgtgggaaaaacccgccgggcaaaaggcattg
gagcaggtcagcgaactgcaacgctgcgccggtcatggcggcgtgctggctccgttcgat
tacaacaccctgtttcgcaacctgctgaatcaggccgaagtccacgatccgacccgcccg
catccgaatatcatgatctggggcacgctcgaggcccgcgttcagggtgccgatctggtg
atacttggcgggctgaatgacggcatctggcctgccgcgcccaaccccgacccgtggatg
aaccgcgccatgcggcaaaaggctgggctgttgctgcccgaacgccagattggcctgtcg
gcgcatgatttccaacaggcgattggcgcgaaagaagtctggctgacccgcgccctgcgc
gatgccgaggcccagaccgtgccgtcacgctggctgaaccggctgacaaacctgctgggc
ggcctgaaggaaaccggtggtgccgatgcgctgaaaaccatgcaggcgcgcggggatggg
tggctgggtatggtggcggaaatggagcgcatatcagtctctaaaccgcctgaaaagcgc
ccctcacccattccgccaacttccgcacagcccaaatccctgtcggtcactggcatcaca
aaactgatccgcgacccctatgcggtttacgcgggcaaggtgctgcgcatttacccgctg
gacccgatccgccagcaacccgatgcgccgttggcgggcaccgtagtgcacaagatcctt
gagcggttcatcaaggaacgcaccgaagaaacccgtgatcaggccaaagcacgcctgatg
caaattgccgacgaggtgcttgcaaccgacgcaccgtggcccgccgcgcgccgtgtctgg
cgggcgaaactggcgcgggttgcggactggtttttgcaaggggaagaagatcgcgctaaa
ctggccaaagtattcaagctggaacagacgggtgcggccaaagtcggcacgctggatttc
accctgactgcgcgggccgatcggctggaccgttcggacgacgggctgacctatatctat
gattacaaaaccggcaaaccaccaacgaaaaagcagcagatcgagtttgataaacaaatg
ttgctgacggctgcgatggtagaacgggcggggttcaagggattggccgatacccgcgtt
ggcggcgccgctttcatcgggctgggggccagccccgaggtggtgcccgccccgctggat
gaaaccgacctgaacacgatctgggccgagttagagacgctaatttccacctataccgcc
ggcgaaaagggctatacatcccgccgcgcgatggagaaaaccagctattcctacgactat
gaccatctggcccgctatggcgaatgggacgaaagcgacacaccagaacaggaggcgctg
acatga
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