Pantoea sp. MT58: IAI47_06580
Help
Entry
IAI47_06580 CDS
T10894
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamt03400
]
IAI47_06580
DNA repair and recombination proteins [BR:
pamt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
IAI47_06580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DUF7577
AAA_30
zf-tcix
SLFN-g3_helicase
Zn_Ribbon_1
AAA_22
AAA_16
DZR
SNF2-rel_dom
TniB
AAA
Motif
Other DBs
NCBI-ProteinID:
QNQ59903
LinkDB
All DBs
Position
complement(1368785..1370539)
Genome browser
AA seq
584 aa
AA seq
DB search
MSFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESQRKVVFGSVQSVARNLDQFDSAFSLVIVDECH
RIGDDKESQYQQIFNHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKSLFRD
CIYELPLRYMIKHQFLVPPERLDMPVVQYDFSRLTAQSNGLFSEADLNRELKQQQRVTPH
IIRQIVEFAEDRLGVMIFASTVEHAREILRLLPENSALVSAETPARERDALILAFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNPH
DLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATEDGMVIEHFGRRCQGVLEDDEGE
REQCDFRFRFKSCPDCGAENDIAARRCHQCDKILVDPDDMLKAALKLKDALVLRCGGMTL
EQGHDAKGEWLKATYFDEEGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVPLGWQTAA
DVLALQPLLRHPDFVVARAKGQFWQIREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaccttacgcccctatcaacaggatgcggtgaatgccaccgtggcgcatttc
cgtcgccatcaggaacctgccgtcattgtgctgccaaccggtgccggcaagagtctggtg
attgccgagctggcccggctggcccgtggccgggtgctggtgctggcgcacgtcaaagag
ctggtggcgcagaaccacagtaaatatcaggcctacgggctggaggcggatatctttgct
gccggacttcagcgcaaagagagtcagcgcaaagtggtgtttggcagcgtgcagtcagtg
gcgcgtaacctcgaccagttcgacagcgccttctcgctggtgattgtcgatgagtgtcac
cgcattggcgatgataaagagagtcagtatcagcagatctttaatcatctgcgtcagcac
aatcctcagttgcgtttactgggactgaccgctacgccgttccgtctgggtaaaggctgg
atttatcagttccattatcacggcatggtgcgtggcgatgaaaaatcgctgtttcgcgac
tgtatctatgaactgcccctgcgctacatgatcaagcatcagtttctggtgccgccggaa
cgactggatatgccggtggtgcagtatgacttcagccgtctcacggcgcagtccaacggc
ctgttcagcgaagccgatctgaaccgtgaactgaagcagcagcagcgcgtgacgccccat
atcatccgccagatcgtggagttcgctgaagatcggctgggcgtgatgattttcgcctca
acggtggagcatgcacgcgaaatcctgcggctgctgccagaaaacagcgcgctggtctcg
gccgaaacgccagccagagagcgcgatgccctgattctggcgtttaaggcgcagcagctg
aaattcctggtgaatgtggcggtgctgaccaccgggtttgatgcgccgcacgttgacctg
attgcaatcctgcggccgaccgagtcggtcagcctctatcagcagatcgtcggacgcggc
ctgcggctctcaccgggtaaaaccgactgcctgatcctcgattacgcgggtaatccgcac
gatctctttacgcccgaagttggcgcccccaaaggggccagcgacaatcagccggttcag
gttttctgtcccgcctgcggtttcgccaacaccttctggggcaaggcgaccgaagatggc
atggtgatcgagcattttggccggcgctgtcagggcgtactggaagatgacgaaggtgag
cgcgaacagtgtgatttccgcttccggtttaaaagttgtcccgactgcggcgcagagaat
gatattgccgcccgacgttgtcaccagtgcgacaaaattctggtcgatccggacgatatg
ctgaaagcggcgctgaaactgaaagacgcactggtgcttcgctgtggtggcatgacgctg
gaacagggccatgacgccaaaggggaatggctgaaggcgacctattttgatgaggaaggc
accagcgtcagcgaacgctttcgtctgcagacgccggcccagcgtaaggcgtttgaacag
ctctttatgcgtccccatcagcgcgcccccggcgtgccgctgggctggcagaccgccgct
gacgtcctggcactccagccgctgctacgtcatcccgattttgtcgtcgcacgggccaaa
ggccagttctggcagatccgcgagaaaatgttcgattatcagggccgctatcgccgcgcc
aatgagctgcgttaa
DBGET
integrated database retrieval system
