Pantoea sp. MT58: IAI47_09695
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Entry
IAI47_09695 CDS
T10894
Symbol
rhaS
Name
(GenBank) HTH-type transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamt03000
]
IAI47_09695 (rhaS)
Transcription factors [BR:
pamt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IAI47_09695 (rhaS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
AAA_34
HHD_RTEL1
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QNQ57046
LinkDB
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Position
complement(2052037..2052858)
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AA seq
273 aa
AA seq
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MTILHSADFFPEGDYAIAIEPRHPQAAFPEHHHDFHEIVLVEQGAGIHVFNGQPQTLCAG
CVCFVRDHDRHLYEQTDNLCLTNVLYRSPGAFRFLSGLQALLPRDQDGQYRSHWRINHKV
MTQALCVASQMQPDESWSLEKQARQEQLFLQLLVLLREACIDGQSQDLEARLHRLLDWLG
DHYSDEIVWDELADRFSLSLRTLHRQMKQQTGSTPQRYLNRLRLLQARHLLRHSDMRITD
IAFQCGFGDSNHFSTLFRREFGCAPRTERQQML
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccattttacacagtgcggatttcttccccgaaggtgattacgccatagcaatagaa
ccccgacacccgcaggcagcctttccggaacatcatcatgacttccatgagattgtgctg
gttgaacaaggcgccggcattcatgtattcaatggtcagccacaaacgctttgcgcgggg
tgcgtctgctttgttcgggatcacgatcgtcatctctatgagcagacagataatctttgc
ctgaccaacgtgctctatcgcagtcccggcgcgtttcgctttctctccgggctacaggcc
ttactgccccgcgatcaggatgggcaatatcgctctcactggcgcatcaatcacaaagtg
atgacgcaggcgctgtgtgtggcatcgcaaatgcagcccgatgagagctggtcgctggag
aagcaggcacgacaggagcagctttttttacagctgctggtgctgttgcgagaagcatgc
attgacggacagagtcaggatctggaggcacggttgcatcgcctgcttgactggctgggt
gatcactacagtgacgagattgtctgggatgagctggccgatcgcttctcactgtcgctg
cgtacgctgcatcggcaaatgaagcagcagaccggcagcacgccgcagcgctatcttaac
cgtctgcggctattacaggcccgtcatctgctgcgtcacagtgatatgcgcattactgat
attgccttccagtgtggatttggtgacagcaaccatttctcaacgctgttcaggcgcgaa
tttggctgcgcaccgcgaacggagcgtcagcaaatgctgtaa
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