Pantoea sp. MT58: IAI47_13505
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Entry
IAI47_13505 CDS
T10894
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pamt Pantoea sp. MT58
Pathway
pamt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IAI47_13505 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamt03400
]
IAI47_13505 (uvrB)
DNA repair and recombination proteins [BR:
pamt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IAI47_13505 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IAI47_13505 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QNQ57732
LinkDB
All DBs
Position
complement(2863990..2866011)
Genome browser
AA seq
673 aa
AA seq
DB search
MTKAFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIDSVVPR
FTIYPKTHYVTPRERILQAMEDIKVELADRRRVLLENNKLLEEQRITQRTQFDLEMMSEL
GYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVGTQVDDLLSEIRQRVAINERVLVTVLTKRMAEDLTEYLTEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMARAIEETERRREKQQLHNEQNGIVPQGLNKKITDILELG
NNIVKTRGKAKPARPGEAQALADFKLLTPQALQKKIHELEGQMQQHAQNLEFEQAANVRD
QLHELRTLFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcctttaaattgaattccgccttcaaaccttcgggcgatcagcctgaggcg
attcgtcgcctggaagaggggctggaggatggactggcccatcagaccttattgggtgtg
acgggttctggtaagacctttaccgtcgccaacgtgattgccgacctcaaccgcccgaca
atggtgctggccccgaacaagacgctggccgcccagctttatggcgagatgaaagagttt
ttcccggataacgccgtcgagtttttcgtctcttactacgattattaccagcctgaagcc
tatgtaccgagctcagacacttttattgaaaaagatgcatcggttaacgaacacattgag
cagatgcgtctctcggccactaaggcgctgctggagcggcgcgacgttatcgtcgtcgcg
tcagtttcggcaatctatggtctgggcgatcccgatctctatctgaaaatgatgctgcac
ctcacccgcggcatgattattgatcagcgtagcatcctgcgccgcctgtcagaattgcaa
tacacccgtaacgatcaggcgtttcagcgcggtactttccgcgtgcgtggtgaagtgatc
gatattttcccggcagagtcggacgatattgcgctgcgcgttgaactgtttgatgaagag
gtggagcgtctgtcgctgtttgacccgctgaccggccagatcgattccgtggtgccgcgt
tttaccatttaccccaagacgcactatgtcacgccacgtgagcgcattctgcaggcaatg
gaagatatcaaagtcgagctggcggaccgccgccgggtgctgcttgagaataataagttg
ctggaagagcagcgcattacccagcgtacccagtttgacctggagatgatgagcgaactg
ggctactgctctggcatcgagaactactcgcggtatctttctgcacgcggaccgggcgaa
gccccgccgacactgtttgattatctgccggcggatggcctgctggtagtggatgagtca
cacgtcaccattccgcagattggcggcatgtacaaaggtgaccgggcgcgtaaagagacg
ctggttgagtatggcttccgcctgccgtcggcgctggataaccgtccgatgaagtttgaa
gagtttgaagcactggcgccgcagaccatctatgtttctgccacgccgggcaaatatgag
ctggaaaaatcgggcgacgaagtggtcgatcaggtggtacgtcctaccggcctgctggac
cccatcattgaagtgcgcccggtcgggacgcaggtcgacgatttgctgtcagaaatccgt
cagcgcgtggcaatcaacgaacgtgtgctggtcacggtgctgaccaaacgcatggctgaa
gatctcaccgagtatctgacggagcatggcgagaaggtgcgttatctgcactccgatatc
gacactgtggagcgtatggagattattcgcgacttacgtctgggggagtttgatgtgctg
gtgggcatcaacttactgcgtgaggggctggatatgccggaagtctctctggtcgcgatt
ctggatgcggataaagagggcttcctgcgttctgaacgatcgctgattcagaccattggt
cgtgcggcgcgtaacatcaacggtaaggcgattctttacggcgataaaattacgccgtcg
atggcacgcgccattgaagagaccgagcgtcgccgtgagaagcagcagctacacaacgag
caaaacggcattgtgccgcaggggctgaacaagaagatcaccgatattctggaactgggt
aacaacatagtgaaaacccgcggcaaagcgaaaccggcacgtcctggcgaagcccaggca
ctggccgatttcaagctgctaacgccgcaggctctgcagaaaaagattcacgagctggaa
gggcagatgcagcaacacgcgcagaacctggagttcgaacaggcggcaaatgtgcgcgat
cagctgcatgagctgcgaacgctgtttattgcggcctcgtag
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