Pantoea sp. MT58: IAI47_13755
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Entry
IAI47_13755 CDS
T10894
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pamt Pantoea sp. MT58
Pathway
pamt00020
Citrate cycle (TCA cycle)
pamt00190
Oxidative phosphorylation
pamt00650
Butanoate metabolism
pamt00720
Other carbon fixation pathways
pamt01100
Metabolic pathways
pamt01110
Biosynthesis of secondary metabolites
pamt01120
Microbial metabolism in diverse environments
pamt01200
Carbon metabolism
Module
pamt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pamt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pamt_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IAI47_13755 (sdhA)
00650 Butanoate metabolism
IAI47_13755 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
IAI47_13755 (sdhA)
00720 Other carbon fixation pathways
IAI47_13755 (sdhA)
Enzymes [BR:
pamt01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IAI47_13755 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Motif
Other DBs
NCBI-ProteinID:
QNQ57775
LinkDB
All DBs
Position
complement(2913524..2915290)
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AA seq
588 aa
AA seq
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MSLPIREFDAVVIGAGGAGMRAALQISQGGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNADGAVVGC
TAICIETGETVYFKAKATILATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSMMIEIREG
RGCDGPWGPHLKLKLDHLGKEVLESRLPGILELSRTFAHADPIKEPIPVIPTCHYMMGGI
PTKVTGQALRVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLL
ESIKEQGDLRDASEDEIAVAMARFNRWENNTTGEDPVEIRKALQRCMQNNFSVFREGDAM
AQGLKELKEIRERLKSARLDDRSPDFNTQRIECLELDNLMETAFATAVAANYRTESRGAH
SRFDFPDRDDENWLCHSLYVPETESMTRREVNMQPKLRAAFPPKVRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccaatcagagagttcgatgccgtggtaatcggcgcaggtggcgcaggaatg
cgggccgcactgcaaatctcccagggcggccagacctgcgctctgttatctaaagttttc
ccgacccgttcccacacagtatctgcgcagggcggtattaccgttgcgctgggtaatacc
catgaagataactgggaatggcatatgtacgacaccgtcaaagggtccgactacatcggt
gaccaggacgcgattgaatatatgtgcaaaaccggcccggaagcgattctggaactggag
cacatgggcctgcctttctcgcgtctggaagatggtcgtgtttatcagcgtccgtttggt
ggtcagtcgaagaatttcggtggcgagcaggcggcacgtaccgcggccgcagctgaccgt
actggtcacgcgttgctgcacacgctttatcagcagaacctgaaaaacaaaaccaccatc
ttctctgagtggtatgcactggatctggtgaaaaatgccgatggcgcagtcgttggatgt
accgcaatctgcatcgaaaccggcgaaaccgtttatttcaaagcgaaagcgaccattctg
gcaaccggcggcgcaggccgtatttaccagtccaccaccaatgcgcatatcaacaccggt
gacggcgtcggtatggcactgcgtgcgggcgtgccggtgcaggatatggagatgtggcag
ttccacccaaccggtatcgccggtgcgggcgtgctggtcacagaaggctgtcgtggtgaa
ggcggctatctgctgaacaaacatggcgaacgcttcatggagcgttatgcgccaaatgcc
aaagatctggcgggccgcgacgtggttgcgcgctcaatgatgattgaaattcgtgaaggt
cgcggctgtgatggcccatggggtccgcatctgaagctgaaactggatcacctcggtaaa
gaggtgcttgagtcacgtctgccaggcatccttgagctgtctcgcacctttgcccatgcc
gatccgattaaagagccgattccggttattccaacctgccactacatgatgggcggtatt
ccgaccaaagtgaccggtcaggcactgcgcgtgaatgagcagggcgaagatgtggtgatt
ccaggcctgttcgctgtcggcgaaattgcctgtgtatccgtccatggtgccaaccgtctg
ggcggtaactcactgctcgacctggtggtctttggccgtgcagccggtctgcatctgctg
gagagtattaaagagcagggcgacctgcgcgatgcttctgaagatgagattgccgtagcg
atggcgcgcttcaaccgctgggaaaacaatactaccggtgaagatccggttgagattcgt
aaagcgctgcaacgctgcatgcagaacaacttctctgtattccgcgaaggcgacgcaatg
gcgcagggtctgaaagagctgaaagagattcgcgagcgtctgaagtcagcgcgtctggat
gaccgctcaccagatttcaatacgcagcgtattgagtgccttgagctggataacctgatg
gagacggcttttgccacggcggtagcggctaactatcgcaccgagagccgcggtgcacac
agtcgcttcgacttcccggatcgtgatgatgaaaactggctgtgccacagtctttatgtc
ccggaaaccgaaagcatgacgcgccgtgaggtgaacatgcagccgaaactgcgcgcggcg
ttcccgccgaaagtgcgtacctactaa
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