Pantoea sp. MT58: IAI47_15055
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Entry
IAI47_15055 CDS
T10894
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pamt03009
]
IAI47_15055 (dbpA)
Enzymes [BR:
pamt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IAI47_15055 (dbpA)
Ribosome biogenesis [BR:
pamt03009
]
Prokaryotic type
rRNA helicases
IAI47_15055 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QNQ58018
LinkDB
All DBs
Position
3175191..3176573
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AA seq
460 aa
AA seq
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MTAFSTLNSLPDSQLDNLREMGYTSMTPVQAATLPAILQGRDVRAQAKTGSGKTAAFGIG
LLHHIDSTRFQTQALILCPTRELADQVGNVLRQLARFTRNIKVLTLCGGQPMSAQRDSLV
HPPHIVVGTPGRILDHINRENLKLDQLNTLVLDEADRMLEMGFLNDMETIIEATPASRQT
LLFSATWPDGITAISTRFQRDALSVVTEEVSELPSIDQQFFEASHNEKLGLLIALLSDRQ
PSSCVVFCNTKRECDDVAAALNARDISALPLHGDLEQRDRERVLIRFANGSGRVLVATDV
AARGLDIKSLAMVVNYQLAWDPEIHLHRIGRTARAGEHGVAVSLVAADEMARAHALEDFL
QQKLPWVSASTLKKGSSKPLPAAMMTLCIDGGRKAKMRPGDILGALTGEAGYRADQIGKI
VLTPTHAYVAIEANHAKAALVKLKQGKIKGKTCRAILLKD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttctaccctcaattcgcttcccgacagccagctcgataacctgcgcgag
atgggctacaccagcatgacgcccgtgcaggctgctacgctgcccgccatactacaggga
cgcgacgtgcgtgcgcaggcgaaaaccggcagcggtaaaacggctgcctttggtattgga
ttactgcaccatattgacagcacccgctttcagactcaggcactcatcctgtgtccaacc
cgggaactggccgatcaggtgggcaacgtgctgcgccagctggcccgcttcacccgaaac
atcaaagtcctcaccttgtgtggcggacaaccgatgagtgcacagcgtgactcgctggtg
catccaccgcatatcgtggtcggcacgccgggtcgtatcctcgaccacatcaaccgcgaa
aacctcaaactggaccagctcaacacgctggtactggatgaggcagatcggatgctggag
atgggtttcctcaatgatatggaaactatcattgaggcgacgcccgcctcgcgccagacg
ctgctcttttccgctacgtggcccgacggcatcaccgccatcagtacccgcttccagcgt
gatgcgctgagcgtggtaactgaagaagtcagcgaactgccttcaattgaccagcagttc
tttgaagccagccacaatgaaaaactgggtctgctcatcgcactgcttagcgaccgtcag
ccctcatcctgtgtggtcttctgcaacaccaaacgtgaatgtgacgatgtcgctgcggcg
cttaacgcgcgtgatatcagcgccctgccattgcatggtgacctggaacagcgcgatcgc
gaacgtgtgctgatccgttttgctaacggcagtggacgcgtactggttgccaccgatgtc
gccgcgcgcggactggatatcaaatcactggcgatggtggtcaactaccagctcgcctgg
gatcctgaaatccacctgcaccgcatcggtcgtaccgcacgtgcaggcgaacatggcgtt
gccgtcagcctggttgctgccgatgaaatggcgcgcgcacatgcactggaggatttcctg
cagcaaaaactgccgtgggtttctgccagcacgctgaaaaaaggcagtagcaagcctctg
cctgccgccatgatgacattgtgtattgatggtggtcgtaaagccaagatgcgtccggga
gacattctgggtgcgctgaccggtgaagcgggttatcgcgccgatcagatcggtaaaatc
gttctgaccccaacccatgcctacgtggcgattgaagcgaaccacgctaaagcggcactg
gtgaaactcaagcagggcaaaatcaaaggcaaaacctgccgggcgattctgctgaaggac
tga
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