Pantoea sp. MT58: IAI47_15625
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Entry
IAI47_15625 CDS
T10894
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamt03016
]
IAI47_15625 (thpR)
Enzymes [BR:
pamt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IAI47_15625 (thpR)
Transfer RNA biogenesis [BR:
pamt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IAI47_15625 (thpR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
QTMAN_N
Motif
Other DBs
NCBI-ProteinID:
QNQ58120
LinkDB
All DBs
Position
3296853..3297410
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AA seq
185 aa
AA seq
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MATQRLFFAISLPDEMQQQLVHWRADNFPAEAGQPVVAANLHLTLAFLGEVAPQTSQQLQ
TLASRIIQPGFDLDLDDAGHWPRPGVVWLGCQRAPLGVLQLASLLRAQAARHGCYQSPQP
FHPHITLLRHATQPVALPPRGFHWRFRVSTFSLFASEYSRGRTRYRALASWPLTSQDPHA
LLSSS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaacgcttattttttgccatcagcctgcctgacgagatgcagcagcaactg
gtgcactggcgggcagacaactttcctgccgaggcgggccagccagtggtcgcagcgaat
ctgcatctgacgctggcatttctgggtgaggtcgcgccgcaaacctcccagcaactgcaa
acgctggcttcccgcattatccagcccggttttgatctcgacctggatgatgccggacac
tggccacgtccgggcgtggtctggctgggttgccagcgcgcaccactgggtgtgctgcag
ctcgccagcctgctccgtgcgcaggccgcccgacatggctgttaccagagtccgcagccg
tttcatccacatatcacgctgttacgccatgccactcagccggttgcgttaccgccacgc
ggctttcactggcgttttcgcgtctccacgttttccctgtttgcctctgaatattcccgg
ggccgcacccgctatcgcgctctggccagctggccattaacgtctcaggatccgcatgca
cttctctcctcctcttaa
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