Pantoea sp. MT58: IAI47_15645
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Entry
IAI47_15645 CDS
T10894
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pamt Pantoea sp. MT58
Pathway
pamt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAI47_15645 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pamt03019
]
IAI47_15645 (pcnB)
Enzymes [BR:
pamt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IAI47_15645 (pcnB)
Messenger RNA biogenesis [BR:
pamt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IAI47_15645 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF4838
TOR1L1_N
Motif
Other DBs
NCBI-ProteinID:
QNQ58124
LinkDB
All DBs
Position
3299813..3301252
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AA seq
479 aa
AA seq
DB search
MPLSRCPIFTRVANFCRKVLKRDEEEAPAEVEPERLMTIIPRESHTISRKDISENALKVL
YRLNKAGYEAYLVGGGVRDLLLGQKPKDFDVTTNATPEQMRKLFRNCRLVGRRFRLAHVM
FGPEVIEVATFRGHHQVEEIAEDRNSSQRAQSGMLLRDNIFGSIEDDAQRRDLTINSLYY
SVADFSVRDYVGGISDLEQGIIRLIGDPETRYREDPVRMLRVARFAAKLNMRIAPETAEP
IPRLASLLRDIPPARLFEESLKLLQAGYGYSTYLKLCEYQLFQPLFPTLARNFTENSDSH
MERMLAQVLKNTDNRIHNDMRVNPAFLFAAMFWYPQLEAAERIAQESGLTYFEAFAMAMN
DTLDEACRALAIPKRITSLIRDIWLLQLRMSRRHGKRAWKLMEHPKFRAAYDLLALRAEV
ENNPELLRLSQWWGEFQVAAPPHQKNMLNNLGDDPVPRNKSRRPRRRPSAPRRDNQNAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttgccactgtcgaggtgtcccatttttacccgagtagctaatttttgccggaaagtcctg
aagcgtgatgaagaggaagccccagcagaggttgaaccagagcgtctgatgaccatcatc
cctcgtgaaagccataccatctcacgtaaagacatcagcgaaaatgccctcaaagtgctc
tatcgcctgaacaaagccggttatgaagcctatctggtaggcggtggcgtgcgcgatttg
ctactggggcaaaaacccaaagatttcgacgtgaccaccaacgccacaccagagcaaatg
cgtaagctgttccgcaactgtcgcctggtcggtcgtcgtttccgtctggcacacgtcatg
tttggcccggaagtgatcgaagtcgcaacgttccgtggccatcatcaggtggaagagatt
gcagaagatcgtaacagttcgcagcgcgcccagagtggcatgctgctgcgcgataatatc
tttggttctatcgaagatgatgcccagcgtcgcgatctcaccatcaacagcctctactac
agcgtggctgatttcagcgtgcgcgactatgtcggcggcatcagcgatctcgaacagggc
attatccgcctgattggcgatccggaaacccgctaccgtgaagatccggtgcggatgctg
cgcgttgcgcgttttgccgccaagctcaatatgcgtattgcgccggagaccgccgagccg
attccgcgtctcgcctcactgctacgtgatatcccgcctgcacgcctgtttgaagagtca
ctgaaactgctacaggccggatacggttacagcacctatcttaaactgtgtgaatatcag
ctgttccagccgctgttcccgacgctggcacgcaacttcacggaaaacagcgacagtcac
atggagcggatgctggctcaggtgctgaaaaataccgataaccgcattcacaacgatatg
cgcgttaatccggcatttctgtttgccgcgatgttctggtatccgcagcttgaagcggcc
gaacgcatcgcgcaggaaagtggcctgacctacttcgaagcttttgcgatggcgatgaac
gatacgctggatgaagcctgccgtgcgctggcgattccgaagcgtattacttcgcttatc
cgcgatatctggctgttgcagttacgcatgtcacgccgtcacggtaaacgtgcctggaaa
ctgatggagcatccgaaattccgcgccgcttacgatctgctggcgctgcgggcagaagtg
gaaaataaccctgaactgctgcgcctgagccagtggtggggtgaattccaggtggctgcg
ccgccgcatcagaaaaacatgctgaataacctgggtgatgatccggtgccacgcaataaa
tcgcgtcgtccgcgccgccgtccttccgcgccgcgtcgtgacaatcaaaacgcctcatga
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