Pantoea sp. MT58: IAI47_16160
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Entry
IAI47_16160 CDS
T10894
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamt03000
]
IAI47_16160 (nhaR)
Transcription factors [BR:
pamt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
IAI47_16160 (nhaR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QNQ58219
LinkDB
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Position
complement(3421346..3422263)
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AA seq
305 aa
AA seq
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MNQLNFNHLYYFWQICKSGSVTAAAEVLSLTPQTITGQIKTLEERLQGKLFRRQGRGLVP
TELGQLVFRYADRMFMLGQEMLDIVNYRKESHLLLDVGVADALSKQLVSKVLETAVVAEE
KTHLRCFESTHEMLLEQLSQHKLDMIISDCSIDPTQQEGLFSVKLGECPVSFWSAQPLTG
LTFPACLEARPLLIPGRRSMLGRKILNWITTQGLQVEILGEFDDAALMKAFGARKNAIFV
APVLDEQDSGQRDAVTEVGRLDTVSEEYHIIFAERMIQHPAVQRLCHADFSGLFPRQSTD
EKKPA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagctcaattttaaccatctctattacttctggcagatctgcaaaagcggctct
gtgacagcggcagcagaggtactctctctgactccccagaccattaccgggcagattaag
acgcttgaggagcgcctgcagggcaagctgttccgtcgtcaggggcggggtctggtgccg
actgaactggggcaactggtgttccgctatgctgaccgcatgtttatgctgggtcaggag
atgctggatatcgtgaactaccgcaaggagtcccacctgttgctggatgtcggagtcgcc
gatgcgctctctaagcagctggtcagtaaggtgctggaaacggcggtggttgcagaggag
aagacgcatctgcgctgttttgagtcgacccacgaaatgctgctggagcagctcagtcag
cataagctggatatgattatctctgactgctccatcgaccccactcaacaggaagggctg
ttttcggtgaagctgggggagtgcccggtcagtttctggtctgctcagccgctcaccggt
ctcacttttcctgcctgcctggaagcgcgtccgctgctgattccaggacgccgctcaatg
ctcggccggaaaatcctcaactggattacgactcaggggctgcaggtggagattctgggg
gagtttgatgatgcggcactgatgaaggcgtttggtgcgcgtaagaatgccatatttgtc
gcgccagtgctggatgagcaggatagcgggcagcgtgatgcggttacagaggttggtcgg
cttgataccgtgtcagaggagtaccatatcatctttgccgaacggatgattcagcatccg
gcggtgcagcgtctctgtcacgcagacttcagcggactctttccccgccagagtacagac
gaaaaaaaaccggcgtaa
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