Pantoea sp. MT58: IAI47_16990
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Entry
IAI47_16990 CDS
T10894
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pamt Pantoea sp. MT58
Pathway
pamt03018
RNA degradation
Brite
Enzymes [BR:
pamt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IAI47_16990
Messenger RNA biogenesis [BR:
pamt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IAI47_16990
Ribosome biogenesis [BR:
pamt03009
]
Prokaryotic type
rRNA helicases
IAI47_16990
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QNQ58359
LinkDB
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Position
complement(3603869..3605797)
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AA seq
642 aa
AA seq
DB search
MTDIQTTFADLGLNADILESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLHNIDPTVKAPQILVLAPTRELAVQVAEAVTEFSKHMRGLNVVALYGGQRYDVQLR
ALRQGPQVVVGTPGRLLDHLKRGTLDLSNLRGLVLDEADEMLRMGFIEDVETIMAQIPAD
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSLTTRPDISQSYWTAYGRKTDALVRFLE
AEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLGERRLAKFAAKVQQQLESSDLDQYRALLAKMQPEDEMDLETL
AAALLKMAQGERPLILPPEAPRPARREYRDRDERDGRRDSREARGDRAPRENRESRDGDR
PRRERRDVGEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPK
GMPGDVLQHFTRTRILNKPMNMQLLGDAQPNEGRGDRRPAGGERRGPGAGGPGAANREGG
RRFSSERREGGREGGGRTFNREGSRGPRREEGAAAAPRRRDA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattcaaaccacttttgctgaccttggcctgaacgccgacatccttgaatca
ctgaatggcatgggctacgtaaagccatccccaatccaggctgagtgtattcctcacctg
ctggcgggccgtgacgtgttaggcatggcgcagaccgggagtggtaaaactgcggctttc
tctctgccgctgttacacaacattgatcctactgttaaagcgccacagatcctggtgctg
gcacctacccgcgaactggcggtacaggttgctgaagcagttaccgaattctctaaacac
atgcgtggcctgaacgtcgtcgccctttacggcggccagcgttatgacgtgcagctgcgc
gcactgcgtcagggtccacaggttgttgtaggtacgcctggtcgtctgcttgaccacctg
aaacgcggtacgttagacctgtctaacctgcgtggtctggtgctggatgaagctgatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcacagattccagcggat
catcagactgcgctgttctctgcaactatgccggaagcgattcgtcgtatcactaaacgc
ttcatgaaagatccacaggaagtgcgtattcagtcaagcctgaccacgcgtcctgatatc
agccagagctactggactgcttatggtcgtaagaccgatgcactggttcgcttcctggaa
gctgaagactttgatgctgctattatcttcgtgcgtactaaaaacgcgacccttgaagtg
gcagaagcgctggagcgtagtggctataacagcgccgcgctgaacggtgacatgaaccag
gcactgcgtgagcagacgctggaacgcctgaaagatggtcgtctcgacatcctgattgca
accgacgttgcggcccgtggcctggacgtagagcgcatcagcctggttgtgaactacgac
atcccgatggattcagagtcttacgttcaccgtatcggccgtaccggtcgtgccggtcgt
gctggccgtgcgctgctgtttgttgagaaccgcgagcgtcgtctgctgcgtaacatcgaa
cgtacaatgaagctgaccattcctgaagttgaactgcctaacgcagaactgctgggtgag
cgtcgtctggctaaatttgccgcgaaagtacagcagcagctggaaagcagcgatctggat
cagtaccgtgctctgctggctaaaatgcagcctgaagatgaaatggatctggaaacactg
gcagctgcactgctgaagatggcacagggcgaacgtcctctgattctgccaccagaagca
ccacgtcctgcacgtcgcgaataccgcgatcgtgacgagcgtgatggccgtcgtgacagc
cgtgaagcgcgtggcgatcgtgctccgcgtgaaaaccgcgaaagccgtgatggcgaccgt
ccacgtcgcgaacgtcgtgacgttggtgaaatgcagctgtaccgcattgaagtaggccgc
gatgatggtgttgaagttcgtcacattgttggcgctatcgctaacgaaggcgacatcagc
agccgctatatcggtaacatcaagctgtttggcacccactcaactatcgagctgccgaaa
ggcatgccaggcgatgtgctgcagcacttcacccgtacgcgtattctgaacaaaccgatg
aatatgcagctgctgggtgatgcacagccaaacgaaggccgtggtgatcgtcgtccagct
ggcggtgagcgtcgtggtccaggtgctggcggtccgggcgcagctaaccgtgaaggtggt
cgtcgcttctcttctgaacgccgtgaaggtggtcgtgaaggcggtggacgtacatttaac
cgtgaaggtagccgtggtccacgtcgtgaagaaggcgcagctgccgctccacgtcgtcgt
gatgcataa
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