Pantoea sp. MT58: IAI47_17005
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Entry
IAI47_17005 CDS
T10894
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pamt Pantoea sp. MT58
Pathway
pamt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAI47_17005 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pamt03019
]
IAI47_17005 (pnp)
03016 Transfer RNA biogenesis [BR:
pamt03016
]
IAI47_17005 (pnp)
Enzymes [BR:
pamt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IAI47_17005 (pnp)
Messenger RNA biogenesis [BR:
pamt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IAI47_17005 (pnp)
Transfer RNA biogenesis [BR:
pamt03016
]
Prokaryotic type
tRNA degradation factors
IAI47_17005 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
S1_RRP5
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QNQ58361
LinkDB
All DBs
Position
complement(3606990..3609125)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKSKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLISRLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVHPDIVAMMGASAALALSGLPFNGPIGAARVGYINDQYVLNPTADELKQSRLDLVVA
GTQNAVLMVESEAEILSEEQMLGAVVFGHDQQQIVIENINALVAEAGKPRWDWQPEAANT
ALISRVAALAEARISDAYRITDKQERYTQVGVIKDETIAALLAEDETLDGSEIGDIVHSL
EKTVVRTRILNGEPRIDGREKDMIRGLDVRTGVLPRTHGSSLFTRGETQALVTATLGTTR
DAQNLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKAED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQEALNQAKGARLHILGVMEQA
ISTPRTEISEFAPRIYTIKISSDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGLKAKEAIRRIEEITAEIEVGRVYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRVRLSIKEATESKPQTEEAAAVITPDAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtacgcaaattccaatatggtcaacataccgtcacgctggaaacc
ggcatgatggctcgccaggcgacagccgctgtaatggtgagcatggacgatactgcagtg
ttcgtcactgttgtaggtcagaaaaaatctaaaccaggtcaggacttctttccactgacc
gtaaactatcaggagcgtacttacgctgctggtcgtatcccaggcagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaacgctgatttcgcgtctgattgaccgcccgattcgt
ccactgttcccggaaggctttgttaatgaagtccaggttattgcaaccgtggtttctgtt
aacccacaggttcacccggacatcgttgcgatgatgggtgcttctgccgcgctggcgctg
tcaggtctgccgttcaatggcccaatcggtgcagcgcgcgtagggtatatcaacgatcaa
tatgttctgaacccaactgcagatgagctgaaacagtctcgtctggatctggttgttgcg
ggtacgcagaatgccgttctgatggttgaatctgaagctgagatcctgtcagaagagcag
atgctgggcgctgtggtctttggccacgatcagcagcagattgttatcgaaaacatcaat
gccctggttgcagaagctggcaaaccacgctgggactggcagccagaagcggctaacacc
gcactgatttctcgtgttgctgccctggcagaagcgcgcatcagcgatgcttaccgcatc
actgacaagcaggagcgttacacgcaggttggcgtcattaaagacgaaaccattgctgct
ctgctggctgaagatgaaacgctggatggttcagaaatcggcgatatcgtgcatagcctc
gaaaaaaccgtcgttcgtacccgtatcctgaatggcgagccacgtatcgatggccgtgaa
aaagatatgatccgcggtctggacgtgcgtactggcgtattgccacgtacccatggttca
tcactgttcacccgtggtgagacgcaggcgctggttacggccacgctgggtacaacccgc
gatgcgcagaacctggatgagctgatgggcgaacgtaccgacagcttcctgttccattac
aacttccctccgtactctgtcggcgaaaccggcatggtaggttcgcctaagcgtcgtgaa
attggtcacggtcgtctggcgaaacgtggcgtgttagccgttatgccaaaagcggaagat
ttcccttacaccgtgcgtgtagtgtctgaaatcaccgaatctaacggttcttcttcaatg
gcctctgtctgtggtgcttcactggcgctgatggatgcaggtgtgccaatcaaagccgcc
gttgcgggtatcgcaatgggtctggtgaaagaagatgagaagtttgtggttctgtctgac
atcctgggcgatgaagatcacctgggcgacatggacttcaaagtagccggtagccgtgaa
ggtatcaccgcgctgcagatggacatcaaaatcgaaggcatcacgcgtgaaatcatgcag
gaagcgctgaaccaggctaagggtgcgcgtctgcacatcctcggcgttatggaacaggct
atcagcacaccgcgtaccgagatttctgaatttgctccacgcatctacaccatcaaaatc
agctctgacaagatcaaagatgtgattggtaaaggcggctcagtgattcgtgcactgacc
gaagagaccggcacaacgattgaaattgaagatgacggcaccgttaaaattgctgcgacc
gatggtctgaaagcgaaagaagcgattcgtcgtatcgaagagatcactgcagaaatcgaa
gtgggccgcgtttacagtggtaaagtgacccgcatcgttgacttcggtgccttcgtcgct
atcggtggtggtaaagaaggtctggttcacatttcacaaatcgctgataagcgcgttgag
aaagtgactgattatctgcagatgggtcaggaagtgccggttaaggtgatggaagttgat
cgccagggccgcgtacgtctgagcatcaaagaagcgacagaatctaagccgcagactgaa
gaagctgcagcggtgattacacctgacgcggaataa
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