Pantoea sp. MT58: IAI47_17015
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Entry
IAI47_17015 CDS
T10894
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamt03016
]
IAI47_17015 (truB)
Enzymes [BR:
pamt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IAI47_17015 (truB)
Transfer RNA biogenesis [BR:
pamt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IAI47_17015 (truB)
Prokaryotic type
IAI47_17015 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QNQ58363
LinkDB
All DBs
Position
complement(3609837..3610781)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGNIVQTRPVSFSQAELDSALESFRGETL
QVPSMFSALKHQGRPLYEYARQGIVIEREPRPITVYELQFIRWQDNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVTMLRRVQVARYPYERMVTLEQLNTLLAEATDAGISLESQLDPL
LLPMDSPASDFPEVNIPTAVADLFRLGQPVQASNAPAQGLVRVSEGEARKFIGMAEIAAD
GRLAPRRLVVEYQD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtccgcgtcgtcgcggtcgcgacgtccatggcgtgttgttgctggataagcca
caaggcgtctcgtcgaatgatgtcctgcagaaagtaaagcgtatcttcaacgctaatcgc
gcaggacacaccggcgcgcttgatcccctggccactggcatgttgccaatttgcctgggt
gaagcaaccaagttttctcaatatctgctggattccgacaaacgctaccgtgtgatagcc
cgactgggcgagcggactgacacgtcagacgccgatggcaacatcgtgcagacgcgtccg
gtcagcttcagtcaggccgaactcgatagcgccctggagagcttccgcggcgaaacgctg
caggtgccctcaatgttttcggcactgaagcatcagggacgtccgctgtatgagtatgcg
cgtcagggcattgtgatcgagcgtgaaccgcgtccgatcacggtctatgagctgcagttt
attcgctggcaggataatgagctggagctggaaattcactgctccaaaggcacctatatc
cgcaccatcattgatgatctgggtgaaaagctgggatgcggtgcgcatgtcaccatgctg
cgtcgtgtgcaggttgcccgttatccctatgaaaggatggtgacgctggagcagctcaat
accctgctggcggaagccactgacgctggcatctcactggaatcgcagcttgatccgctg
ctgctgccaatggacagcccggcctctgatttccctgaagtgaatatcccgactgccgtg
gcagatttgttccgcctgggacagccagtacaggcgagtaatgcgcctgcacagggactg
gtcagggtatcagaaggcgaagcgcgtaagtttatcggcatggcagaaattgccgctgat
gggcgtcttgcgccgcgtcgtttagtggttgagtatcaggattaa
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