KEGG   Pantoea sp. MT58: IAI47_18105
Entry
IAI47_18105       CDS       T10894                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
pamt  Pantoea sp. MT58
Pathway
pamt03020  RNA polymerase
Brite
Enzymes [BR:pamt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     IAI47_18105 (rpoC)
Transcription machinery [BR:pamt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     IAI47_18105 (rpoC)
DNA repair and recombination proteins [BR:pamt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      IAI47_18105 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: QNQ58559
LinkDB
Position
complement(3850798..3855021)
AA seq 1407 aa
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLEKRQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERVYRAG
LASLHARVKVRITEHEKNEQDEWVAKTSIIDTTIGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKVEIITEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEVVINRDGAEERQVSFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRERVL
GRVTAEDVLKPGTADILVPRNTLLDEHWCDVLELNSVDSLKVRSVVGCETDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGTIKL
TNAKSVTNSAGKLVITSRNVELKMIDEFGRTKESYKVPYGSTMAKGDGEQVAAGETVANW
DPHTMPVITEVGGFIRFTDMVDGQTITRQTDDLTGLSSLVVLDSAERTAGGKDLRPALKI
VDANGNDVLIPGTDMPAQYFLPGKAIVQLEDGVKISAGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPLDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKATIVSAGSADFLEGEQAEFSRIKISNRDLEANGKVGATFMRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRKAAGEVPV
APQVTADEASASLAELLNAGLGGNKND
NT seq 4224 nt   +upstreamnt  +downstreamnt
gtgaaagacttacttaagtttctgaaagcgcaaactaagaccgaagagtttgatgcgatc
aaaattgcgctggcttcgccagacatgatccgttcctggtcttttggtgaagtgaaaaag
ccagaaaccattaactaccgtacttttaagccagagcgcgatggtctgttctgtgcccgt
atcttcgggccggtaaaagactatgagtgcctgtgcggcaagtataagcgcctgaaacac
cgtggtgtgatttgtgagaagtgcggcgttgaagtgacccagactaaagtacgccgtgag
cgtatgggccacatcgaactggcgtcgccgacagcgcacatctggttcctgaagtcactg
ccatcgcgtatcggcttactgctggatatgccactgcgtgacatcgagcgcgtgctctac
tttgaatcttacgtggtaatcgaaggtggcatgaccaacctcgagaagcgtcagatcctg
actgaagagcagtaccttgacgctctggaagagttcggtgacgagttcgacgccaaaatg
ggcgccgaagcgatccaggccctgttgaaaaacatggatctggagcaggagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaaacgtaaaaagctgaccaagcgt
atcaagctgctggaagcgttcgtacagtctggtaacaagccagagtggatgatcctgacc
gtgctgcctgttctgccaccggatctgcgtccgctggtaccgctggatggtggccgtttc
gcaacgtcggatctgaacgatctttatcgtcgcgtgatcaaccgtaacaaccgtctgaag
cgcctgctggatctggctgcgccagatatcatcgtacgcaacgaaaagcgtatgttgcag
gaagcggtcgatgcactgctggacaacggtcgtcgcggtcgtgcgatcaccggttccaac
aagcgtccgctgaaatcgctggctgacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctgggtaaacgtgtcgactattctggtcgttcggttatcaccgttggtccatac
ctgcgtctgcatcagtgcggtctgcctaagaaaatggcactcgaactgttcaaaccgttc
atttacggcaagctggaactgcgtggcctggccaccaccatcaaagccgcgaagaaaatg
gttgagcgcgaagaagcggttgtctgggatatcctcgacgaagtgatccgtgagcacccg
gttcttctgaaccgtgcgcctacgctgcaccgtctgggtattcaggcctttgaaccggtt
ctgatcgaaggtaaagcaatccagctgcacccgctggtttgtgcggcctataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtcgactaacaacatcctgtcacctgcgaacggcgagccaatcatc
gttccttctcaggatgttgtactgggtctgtattacatgacccgtgactgtgttaacgct
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtgtttatcgcgctggc
ctggcctctctgcatgctcgcgttaaagtgcgtatcactgaacacgagaaaaacgagcag
gatgagtgggttgctaaaaccagcatcatcgatacaacgattggccgtgccatcctgtgg
atgatcgtgccgaaaggtctgccgttctctatcgttaaccaggcgctgggcaaaaaagct
atctccaaaatgcttaacacctgttaccgcattctgggtctgaagccgacggttatcttt
gctgaccagaccatgtacaccggtttcgcttacgctgcccgttcaggcgcgtcagtcggt
atcgatgatatggttattccagagaagaaagtggaaatcatcaccgaagcggaagcggaa
gtggctgaaattcaggaacagttccagtctggtctggtaaccgcaggcgaacgttacaac
aaagtcatcgatatctgggcagcagccaacgaacgtgttgccaaggcgatgatggaaaac
ctctctaccgaagttgtgattaaccgcgacggtgcagaagagcgacaggtttcctttaac
agcatctttatgatggccgactccggtgcgcgtggttctgctgcacagattcgtcagctg
gccggtatgcgtggtctgatggcgaaaccagatggttccatcatcgaaacaccaatcacg
gcgaacttccgtgagggtttgaacgtacttcagtacttcatctcaacccacggtgcacgt
aaaggtctggcggataccgcactgaaaacggcgaactccggttatctgacgcgtcgtctg
gttgacgttgcacaggatctggttgttaccgaagatgactgtggtacacacgaaggcatc
atgatgacgccagtgatcgaaggtggcgacgttaaagagccactgcgtgaacgtgtactg
ggtcgtgtgacggcagaagacgttctgaagccgggcactgctgacattctggtcccacgc
aacacgctgctcgatgagcactggtgtgacgtgctggagctgaactcagttgatagcctg
aaagtccgctctgttgtaggttgtgaaaccgactttggtgtgtgtgcgcattgctacggt
cgcgacctggcacgtggtcacatcatcaacaaaggtgaagcgatcggtgttatcgcagca
cagtccatcggtgagccaggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatcacgtgcggctgctgaatccagcattcaggtgaagaacaaaggtaccatcaagctg
accaacgccaagtccgtaacgaactcggcaggcaagctggtgatcacctcgcgtaacgtt
gaactgaaaatgatcgacgaatttggtcgtaccaaagagagctataaagttccttatggt
tctaccatggcgaaaggtgatggtgagcaggttgccgcgggtgaaaccgttgcaaactgg
gatccgcataccatgccagtcatcaccgaagtgggcggtttcattcgcttcactgacatg
gttgatggccagaccattacccgtcagacagatgacttaaccggtctctcttcgctggtg
gttctggacagtgctgaacgtactgcgggcggtaaagatctgcgtcctgcgctgaaaatt
gttgatgccaacggcaacgacgttctgatcccgggcaccgatatgccggctcagtacttc
ctgccaggtaaagcgattgttcagctggaagatggcgttaagatcagtgccggtgacacg
ttagcgcgtgttccgcaggaatctggcggtaccaaagatatcaccggtggtctgccacgc
gttgctgacctgttcgaagcgcgtcgtccgaaagagcccgcgattctggcggagatcagc
ggcatcatctccttcggtaaagagaccaaaggtaagcgtcgtctggtcattaccccgctg
gatggtagcgagccgtacgaagagatgattccgaaatggcgtcagctgaacgtgttcgaa
ggtgaacgtgttgagcgcggtgacgtggtttccgatggcccagagtctccacatgacatc
ctgcgcttgcgtggcgtgcatgcggtgacccgttacatcactaacgaagtgcaggaagtt
taccgtctgcagggcgttaagattaacgataagcacatcgaagtcatcgttcgtcagatg
ctgcgtaaagcaaccatcgtgagcgcaggaagtgcagacttcctggaaggtgagcaggct
gaattctctcgcatcaagatctctaaccgtgatctggaagcgaacggaaaagttggcgca
accttcatgcgtgacctgttgggtattaccaaagcgtcactggctaccgaatcgttcatc
tctgcagcatcgttccaggagacgacacgtgtcctgaccgaagcagcagttgcaggcaag
cgcgacgaactgcgcggcctgaaagagaacgtcatcgtgggtcgtctgattccggccggt
accggttatgcgtaccatcaggatcgtatgcgccgtaaagcggcaggtgaagtgccggtt
gcaccgcaggttactgcggatgaagcctcagccagcctggctgaactgttgaacgccggt
ctcggcggcaacaaaaacgattaa

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