Pantoea sp. MT58: IAI47_18390
Help
Entry
IAI47_18390 CDS
T10894
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pamt Pantoea sp. MT58
Pathway
pamt03420
Nucleotide excision repair
pamt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IAI47_18390 (uvrD)
03430 Mismatch repair
IAI47_18390 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamt03400
]
IAI47_18390 (uvrD)
Enzymes [BR:
pamt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IAI47_18390 (uvrD)
DNA repair and recombination proteins [BR:
pamt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IAI47_18390 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IAI47_18390 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
QNQ58607
LinkDB
All DBs
Position
complement(3913728..3915890)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDNQRAAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKSMNLDDKQWPARQGMWYINGKKDEGLRPKHIESYGNPIEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNNIQYAWIRMLAGDS
GRVIIVGDDDQSIYGWRGAQVENIQRFLQDFPGAETIRLEQNYRSTNNILKAANALIANN
NGRLGKELWTEGSDGEPISIYCAFNELDEARFVVNRIKVWMENGGALNDCAILYRSNAQS
RVLEEALLQSSMPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGVGD
RTLDVVRQTARERQMTLWQATRELLQSRALAGRAASALQRFCELVDSLATETADLPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMMKLTLTYAETRRLYGKEVYHRPSRFIGELPEACIEEVRLRASVSRPVNHQRMG
APVTKNDSGFALGQRVHHAKFGEGTIINLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgatggtttgaatgacaatcagcgcgctgccgttgcggct
ccgcgcagtaacctgctggtgctggcaggcgcgggcagtggtaaaacgcgggtgctggtg
catcgcattgcctggctgatgtcggtggagaattgctctccctattcaattatggcggtg
acctttaccaacaaagcggccgcggagatgcgtcaccgtatcgagcatctgatcggcacc
agtcagggcgggatgtggatcggcaccttccacggcctggcgcaccgtttactgcgcgct
caccatcttgatgccggtctgccgcaggattttcagatcctcgacagtgaagatcagctg
cgtctgcttaagcgcctgattaaatccatgaaccttgatgacaagcagtggcctgcgcgt
cagggcatgtggtacatcaacggcaaaaaagatgaaggcctgcggccaaagcatattgaa
agctacggcaatccgattgagcagacctggctgcgcatttatcaggcctatcaggaagcc
tgtgatcgcgccggtctagtcgatttcgctgagctgctgctgcgcgcccatgagctgtgg
ctcaacaagccgcacattcttaatcactaccgcgaacgttttaccaacgtgctggtggat
gagtttcaggataccaacaacattcagtacgcctggattcggatgctggcgggcgacagc
ggccgggtgatcatcgtgggcgatgatgatcagtcgatctacggctggcgcggcgcgcag
gtcgagaatattcagcgcttcctgcaggatttcccaggcgcggaaaccattcgtctggag
cagaactatcgctcaaccaataacatcctgaaagccgccaatgccctgatcgccaacaac
aatggccgcctgggtaaagagctctggactgaaggcagcgatggtgagccaatctctatc
tattgcgcctttaatgagctggatgaagcacgctttgtggttaaccgcatcaaggtctgg
atggagaacggcggcgcgctcaacgactgcgccattctctatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgctgctgcaaagcagcatgccgtaccgtatttatggcggcatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcctatctgcgtctgatggcgaac
cgcaatgacgacgcggcctttgagcgcgtggtaaataccccgacacgtggcgtgggcgat
cgcacgctcgacgtggtgcgtcagaccgcccgtgagcgtcagatgacgttgtggcaggcc
acgcgcgaactgctgcaaagccgcgcgctggctggccgtgccgcgtctgcgctgcaacgc
ttctgtgagctggtcgattcactggctaccgaaaccgccgatttaccgctgcatgttcag
actgaccgggtcattaaagactcaggcctgtggctgatgtatgagcaggaaaaaggtgag
aagggccaggcgcgtatcgaaaaccttgaggagctggtgacggcaacacgccagttcagc
tatcaggacgaagatgaagatctgatgccgctgcaggccttcttgtcccatgccgccctt
gaagcgggtgaaggtcaggcggacaagtggcaggatgcggttcagttgatgacgctgcac
tcggcgaaagggctggagtttagccaggtctttattgtcggcatggaagaggggatgttc
ccgagccagatgtcgctggatgaaggcggccgtctggaagaggagcgtcgtctggcttat
gtcggcgtaacccgtgccatgatgaagctgacgctgacctacgctgaaacccgccgactc
tatggtaaggaagtgtatcaccggccttcccgtttcatcggcgaactgcccgaagcgtgc
atcgaagaagtgcgtctgcgcgccagcgtgagccgtccggtaaaccatcagcggatgggt
gccccggtgaccaaaaatgacagcggattcgcgctgggtcagcgtgttcatcacgcgaaa
tttggcgaaggcaccatcatcaatctggaaggcagcggtgaacacagccgcctgcaggtg
gcgtttcaggggcagggaatcaagtggctggtggcggcttacgcaaagctggaaacgctt
tag
DBGET
integrated database retrieval system
