Pantoea sp. MT58: IAI47_18590
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Entry
IAI47_18590 CDS
T10894
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
IAI47_18590 (hmsP)
Enzymes [BR:
pamt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IAI47_18590 (hmsP)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
Motif
Other DBs
NCBI-ProteinID:
QNQ58643
LinkDB
All DBs
Position
complement(3958823..3960829)
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMATVSLVAIITISIFIVIQLFHFVQQRRIDYAQQMENIAHTVRQPLSEA
VLRADIPQAERILHSLKPAGILSRADVVLPNAFQALHADFEVEKPVPRLVARLFELPVQI
TLPLYSVENTGMPKPLAYLVLQANSTRVYQFILSTLSTMIITYLLLALILSVAISWCINR
LVVHPLRNLSRELQELPPQSILTHKLSLPQSHRDDEIGMLVRSYNRNQQVLESIHDEMSR
LTTHFPVTDLPNRTLFLALVDQCMRMPEQSLGLMVIRIETLQEANGVLSDEQRDTLMLTL
VEKIRNTLDDHTLLAQTGTSDFVLLMKRASNPFRALRLARNLMIRLNQPVNLHQLQLRPN
LSIGLALHEDQPLSANELLDRATSAMMSARHQGKNQILFFDAALTERAQKRLTQEHDILQ
GLHDDQFALYLQPQVDMRTGALTGAEALLRMRQPDGSYGLTEEFIASAEEIGVISAIGRW
VFEEACRILAGWQRQGIMLPLSVNISAVQLRDTGVVSHLQALLTRHRIAPDTLVLEVTET
AQLDDAEQAMSMLRLLQQTGVAVALDDFGMGYSNLNYLHQLKALPVNKLKMDRSFVAALP
HDDTMVRIVAAIAEIIHLEVIAEGVETAEQRDWLLARGIAIGQGYLYAEALPLTRFNQAW
IENSSLPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtaagccggtcacttacgataaagcagatggcgacagtttcgctggttgcgatt
atcaccatcagtatctttatcgtcatccaactgtttcattttgtgcagcagcgcaggatt
gactacgcccagcagatggagaatatcgcgcacaccgtccgtcagccgctgtcggaagcg
gtgctgcgcgccgatattcctcaggccgaacgtattcttcactccctgaaaccggccggt
attttatcgcgcgccgatgtggtgctgccgaatgcgttccaggctctgcatgcagatttc
gaggtggaaaaaccggtgccgcgtctggtcgcccgcctgtttgagctgccggtgcagatt
accctgccgctctattcagtcgaaaataccgggatgccgaagccgctggcctatctggtg
ttgcaggctaactcgacgcgcgtctaccagtttatcctcagcacgctctcgaccatgatt
atcacctatctgttgctggcgctgattctttccgtggcgatcagctggtgcattaaccgg
ctggtggtgcatccgctgcgcaatctctctcgcgaactgcaggagctgccgccccagtcg
attctgacgcacaagctgtcgctaccgcagagccaccgcgatgatgaaatcggtatgctg
gtccgtagctacaaccgcaatcagcaggtgctggagtcaatccatgatgagatgagccgg
ctgacgacccattttcccgtcaccgatctgcccaaccgcactctgtttctggcgctggtc
gatcagtgcatgcgcatgcctgaacagtcactgggtctgatggtcatccgcattgaaacc
ctccaggaagctaacggcgtactcagcgatgagcagcgcgatacactgatgctgacgctg
gtggagaagatccgtaataccctggacgaccatactttgctggcgcagaccgggaccagc
gattttgtcctgctaatgaagcgtgcaagcaatccgttccgcgcgctgcgtctggcgcgt
aatctgatgattcgcctgaatcagccggttaacctacatcagctccagctgcgccctaat
ctcagcatcggtctggcgctgcatgaggatcagccgctgagtgcgaatgagctgcttgac
cgcgcgacgtcggcgatgatgtcggcccgtcatcagggcaaaaatcagatcctgttcttt
gatgccgcactgaccgagcgcgcgcagaagcgtctgactcaggagcatgacatcctgcag
ggtctgcatgatgatcagttcgcgctttacctgcaaccgcaggtcgatatgcggaccggc
gcgttaaccggcgccgaagccctgttgcgcatgcgccagccagacggcagttatggtctt
accgaagaatttattgccagcgccgaagagattggcgtgattagcgcgataggtcgctgg
gtgtttgaagaggcgtgccgcattctggctggctggcagcggcagggcattatgctgccg
ctgagtgtgaatatttccgctgtgcaactgcgggacaccggcgtggtctctcatctgcaa
gccctgctgacgcgccaccgcatcgcacccgacacgctggtgctggaagtgacagagacc
gctcagcttgatgatgcagaacaggcgatgtcgatgctgcgcctgttgcagcagactggc
gtcgccgtggccctggatgattttggcatgggctactccaacctgaactatctgcatcag
ctgaaagcgttgccggtaaacaagctgaagatggatcgcagcttcgtggcggcgctaccg
catgacgacacaatggtccgtatcgtcgcggctatcgccgagattatccaccttgaagtg
attgccgaaggcgtggaaacagccgagcagcgcgactggcttctggcgcgcggtatcgct
atcgggcagggctatctctacgctgaagccctgcctctgacccgatttaatcaggcgtgg
attgaaaactcctcactgccgcaataa
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