Pantoea sp. MT58: IAI47_19790
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Entry
IAI47_19790 CDS
T10894
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pamt Pantoea sp. MT58
Brite
KEGG Orthology (KO) [BR:
pamt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pamt03000
]
IAI47_19790
Transcription factors [BR:
pamt03000
]
Prokaryotic type
Helix-turn-helix
Other families
IAI47_19790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
Mg_chelatase
PAS_8
MCM
AAA_16
AAA_2
AAA
PAS
AAA_3
HTH_30
HTH_29
HTH_23
HTH_50
Noelin-1
dCache_1
Motif
Other DBs
NCBI-ProteinID:
QNQ61012
LinkDB
All DBs
Position
unnamed1:complement(182543..184504)
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AA seq
653 aa
AA seq
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MNQQLLLRDESEAIFSLPDREAADSWDALLWRSWESFTQGEPPPALRETILHSWQRSQQY
AIDPDRFTYTAPPASELTAILENNAELILVARSIMENLLAYNPDGHINLTDAQGVTLHFC
GADLTPIGSILREEVLGTNCTARCLIEQRLVYVLSGENWKFDLRKRRRQCAAAPVRNENG
QLIGVLTLTATPDNFNVHTLGTVQAAAEAVGQQLMLRRLLAEQQSILETLNEGVIVCDKQ
GRIKTLNRYARQIFSGLNPGNIPIDELLQPQGGSLLTMPFCNDIELQFRPAGLAPLSCLI
SLMPAPDGGRVLSLRENQRIRAITRRVMGVNASYTFDMIRGRSSRLQQAIHKARVSSRTD
STVLLSGESGTGKELFAQAIHNASPRQQEAFIALNCGALPRDLVQSELFGYADGAFTGSR
RGGSAGKFELADGGTLFLDEIGEMPLEAQTSLLRVLQESEVLRIGAAQPVKVNVRIIVAT
HCNLLDAVEKNAFRRDLYYRLNVISLEIPPLRDRREDIPELVNIFIQALCTRLKRIPPVV
APDAMTCLQAWDWPGNVRELENVIERVVNLSEGLEITRADLPESLQQVSASDAPGEIQPS
LQNLERMHILQVVSEQQGNLRQSAQLLGISRTALYNKLNAWKIDYRAFRKNDA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagcaattgttattacgagatgagagcgaggcgatcttcagcctgcccgacagg
gaggccgccgacagttgggacgcgctgttatggcgaagctgggagagctttacccagggc
gaaccgccgccagcgcttcgtgaaactattctgcactcctggcaacgctcgcagcagtac
gctatcgatccagatcgatttacctataccgcgcccccagccagcgaactgactgcgatt
cttgaaaacaatgcagaactcattcttgttgcacgcagcattatggaaaatttgctcgcc
tataatccggacgggcacattaacctcaccgatgcgcagggtgtaacgctccatttttgc
ggtgccgacctgacaccgatcggcagtattctgcgtgaagaggtattgggtactaactgt
accgcgcgctgcctgattgaacagcgactggtctatgtgttgagcggtgaaaactggaag
tttgatttgcgaaaacgccgccggcagtgcgctgcggcccccgtacgtaatgaaaacgga
caattgataggtgtgctcacactgaccgccacgcctgataatttcaacgtccacacactt
ggcacggtccaggcggcggcagaagcagtcggacagcaactgatgctacgacgcctgctg
gctgaacagcagtccattcttgagacgctgaatgaaggtgtgattgtctgtgataaacag
ggacgcattaaaacccttaaccgctatgcgcgccagattttcagcgggctgaatccaggc
aatatcccgattgatgaactgctacagccacaaggcggatcgctgctgaccatgcctttt
tgtaatgacatcgagttgcagttcaggccagccggcctggcccccctctcctgcctgata
tcattgatgcccgcgccggatggcggacgcgtgctgtcgctgcgtgaaaatcagcgtatc
cgtgccattacacgacgtgtcatgggcgtgaatgccagttacacctttgacatgattcgc
ggccgctcgtcgcgtctgcagcaggcaattcataaggcccgggtcagcagccgaaccgac
agcacagtgctgctcagcggtgaaagtggcaccggcaaagagttgtttgcgcaggccatt
cataatgccagcccacgtcagcaggaagcgtttatcgctcttaactgcggcgcactgcca
cgcgatctggtgcaaagcgagctgtttggctatgcggatggcgccttcaccggttcacgg
cgtggtggttcggcgggcaagtttgaactggctgacggcggaacccttttcctggatgag
attggtgagatgccgctcgaagcgcaaaccagcttgctacgcgtgctgcaggagagtgaa
gtgctgcgtatcggcgcggctcagcccgtgaaagtgaatgtccgcattatcgtggcaacg
cactgcaacctgctggatgccgtggagaaaaatgcctttcggcgcgatctctattatcgt
ctgaatgtaatttcattagaaattcctccgctgcgtgaccgtcgtgaagacataccggag
ttggtgaatattttcattcaggcgctctgcacacgtctgaagcgtattccgcctgtggtc
gcgccggacgcaatgacctgtctgcaagcctgggattggccgggaaacgtacgtgaactg
gaaaatgtgattgagcgtgtcgtcaacctgagtgaagggttagaaataacccgcgccgat
ttgcccgaatccctgcagcaagtctcagccagtgatgcgcccggagagattcaaccctca
ctgcaaaatctggagcggatgcatattttacaggttgtcagtgaacaacaggggaatctg
cgtcagtcggcgcaactgctggggatctcacgaacggcgttatataacaagctcaatgca
tggaaaatcgactaccgtgctttcaggaaaaatgatgcctga
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