Paenibacillus amylolyticus: P9222_04870
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Entry
P9222_04870 CDS
T09036
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pamy
Paenibacillus amylolyticus
Pathway
pamy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
P9222_04870 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pamy01007
]
P9222_04870 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pamy03016
]
P9222_04870 (serS)
Enzymes [BR:
pamy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
P9222_04870 (serS)
Amino acid related enzymes [BR:
pamy01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
P9222_04870 (serS)
Transfer RNA biogenesis [BR:
pamy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
P9222_04870 (serS)
Prokaryotic type
P9222_04870 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
GAS
tRNA-synt_His
OVT1
TMF_TATA_bd
BLOC1_2
UPF0242
DUF1664
FapA
DUF724
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
WFR63633
LinkDB
All DBs
Position
complement(964577..965860)
Genome browser
AA seq
427 aa
AA seq
DB search
MLDVKILRNEYARVEEALTKRGKSLDLIAGFTEMDAKRRELLQESETLKSRRNTVSAEVA
RLKKNRENADDLIVEMREVSDRIKAMDEEVRELEVKINDLTMAIPNIPNESVPVGASEDD
NVEIRRWEEPKSFTFAPKAHWEIAQDLDILDFEAAAKVTGSRFTFYKGLGARLERALINF
MMDLHSDQHGYEEILPPYIVNRDSLFGTGQLPKFEEDLFKLKDTEYYLIPTAEVPVTNYH
REEILNVDQLPKHFVAYSSCFRSEAGSAGRDTRGLIRQHQFNKVELLKLSTPETSYEELE
QMTQNAERVLQLLGLPYRVLTLCTADMGFTSAKTYDIEVWLPESNTYREISSCSNCEDFQ
ARRANIRFRREPKAKPEFVHTLNGSGLAVGRTVAAILENYQQEDGTVVIPEALRPYMGGT
SVIARRA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgatgtgaaaatattgcggaatgagtatgcacgtgtagaagaagcattaactaaa
cgtggcaaatcgcttgatcttatcgctggatttaccgaaatggatgccaagcgtcgggaa
ttgcttcaagagagtgaaacgctgaagagccgccggaatacggtctctgcggaagttgcc
agactgaagaagaaccgtgagaatgcggatgatctgattgtggagatgcgcgaagtgtct
gatcgtatcaaagccatggacgaagaagttcgggaactggaagtgaagatcaatgatctc
accatggcgattccgaacattcctaacgaaagtgtacctgttggagcttctgaagacgac
aatgttgagattcgtcgttgggaagagcccaagtcatttacttttgcaccaaaagctcac
tgggaaattgcccaggatctcgatatccttgattttgaagctgctgccaaagtaacagga
tcacgttttaccttttataaaggattgggtgctcgtctggaacgtgcattgatcaacttc
atgatggatctgcacagcgatcaacatggatatgaagagattctgcctccatacatcgtt
aatcgggatagcttgtttgggacaggtcaactgcctaagttcgaagaagacctgttcaag
ttgaaagataccgaatattatctgattcctactgctgaagttccggtaacgaactatcat
cgcgaagagattctgaatgtagatcaattgcctaagcactttgtggcatacagctcttgt
ttccggtctgaagccggttcggctggacgggatacacgcggattgattcgtcagcatcaa
tttaacaaagtggagctgctcaagctctctactccggaaacttcgtatgaagagctggag
caaatgactcaaaatgcggagcgtgtgcttcaattattgggattgccgtatcgcgttctg
acattgtgtactgcagatatgggcttcacttcagctaaaacgtatgatatcgaagtatgg
ttgcctgagagcaacacctatcgtgagatttcttcctgctctaactgtgaggacttccag
gcacgccgtgccaatatccgtttccgcagggagccaaaagccaaaccggaatttgtgcac
acgttgaacgggtcaggattggccgttggacggacggtagcagctatcctggagaactat
caacaggaagatggtacagttgttattcctgaagcattgcgtccttatatgggcggcaca
agtgtgattgcacgtcgcgcttaa
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