Paenibacillus amylolyticus: P9222_07335
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Entry
P9222_07335 CDS
T09036
Name
(GenBank) helicase C-terminal domain-containing protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pamy
Paenibacillus amylolyticus
Pathway
pamy03022
Basal transcription factors
pamy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
P9222_07335
09124 Replication and repair
03420 Nucleotide excision repair
P9222_07335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamy03021
]
P9222_07335
03036 Chromosome and associated proteins [BR:
pamy03036
]
P9222_07335
03400 DNA repair and recombination proteins [BR:
pamy03400
]
P9222_07335
Enzymes [BR:
pamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
P9222_07335
Transcription machinery [BR:
pamy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
P9222_07335
Chromosome and associated proteins [BR:
pamy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
P9222_07335
DNA repair and recombination proteins [BR:
pamy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
P9222_07335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
WFR64014
LinkDB
All DBs
Position
1486407..1488719
Genome browser
AA seq
770 aa
AA seq
DB search
MTTTIRISVRPLVEYVYRSGSIRPGFRNNASMQEGTRIHQRVQKEYTEEDLKEIVLETEI
QHGDLTYVVEGRCDGLIRLEGQLTVDEIKSTAGNLDDLGEGLPVHWAQAMMYAYMYAVQH
DEPRMQVQLTYVHSVNHEERRFRRMAEREELEQFAAEVIAGYAPYAEMIAAYEEKRDLSV
RELPFPFRKYREGQRKLAGAVYKTIREGQGLMAKAPTGIGKTMSVLFPTVKAIGEGEANR
LFYLTARTTTRVAAEEAFARMQSEGLKMHVISLTAKDKICFKEEEACDTGQCGMCEGYYD
RINGAVLDMLEHETLMTRPVIEQYARKHRVCPFEFSLDAAYPADAVICDYNYIFDPRISL
KRMLEEQKRKTVLLVDEAHNLVDRGRTMFSAELEKAVFLDVKREFQTLDSSVPAAKAIVD
YTGAIDKYLITLRKNGGEEGKIIQQEAPEELIERLEPFVMVAEQCLVEGGSGNAETDQLL
LDAYFTAQNFLRIAKLYDERFITYAECVRSEVRVKLFCLDPSVLLRQTAKGFRSLIHFSA
TLSPLRYYRDMLGAEEEDYTLQIPSPFQREQLDVRLMPLSVRYKDREQSRRPIAEMLQQL
VSEWPRSNLMVFFPSYPYMREIYDTYAQLPSEADTVIQKQGMNELEREQFLEGFQPNPER
TRLVFAVMGGVFSEGVDLPGDRLNGVVVVGAGLPQIGLENNVLRDYYDRTGRNGFNYAYI
FPGMNKVLQAGGRLIRTEEDKGVLVLVDDRFIQEPYRSLLPEEWRDYKRI
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacaattcggatatcggttagacctttggtggagtatgtgtaccgcagtggc
agcatacgtccagggttccggaacaatgcctcgatgcaggaggggactcgaatccatcaa
cgggtacagaaggagtacacggaagaggatctgaaagagattgtgctcgaaactgaaatt
caacatggggatctgacctatgtggtcgaagggcgatgtgacggcctgatccggttggaa
ggtcagttaacggtggatgagatcaaatcgactgcaggcaatctggatgacctgggtgag
ggacttcccgtacattgggcgcaggccatgatgtatgcctatatgtacgccgttcagcat
gatgaaccacgtatgcaagtacagctgacgtatgtgcattccgtaaaccatgaagaaaga
cgatttcgccgaatggcagaacgagaggaactggagcagtttgcggcagaagtgattgcc
ggttatgcgccgtatgcggagatgattgctgcatatgaagaaaagcgtgacctcagtgtg
cgagagctgccgtttccttttcgcaaatatcgggaaggacaacgaaagctggcaggagcc
gtatacaagacgatccgtgaaggtcaggggttgatggctaaagcaccaacaggtattggt
aaaaccatgtccgtgctgttccctacggtcaaagccattggcgagggtgaagcgaaccga
ttgttctatctgaccgcgaggacgacgacacgggtggcggcagaagaagcttttgcccgg
atgcagtcggaaggcttaaagatgcatgtgatcagtctgaccgcaaaggacaagatatgt
tttaaggaagaggaagcttgtgatacgggacagtgcggcatgtgcgaaggatattatgac
cgtattaacggggccgtgctggacatgctggaacatgagacgttgatgacacgtccggtc
attgagcagtatgcgcgcaaacatcgggtgtgtccgtttgaattctcactggatgcggcg
tatccagccgatgcggtaatctgcgattataactatattttcgatccgcgtatttctctg
aaacgaatgttggaagaacagaagcgcaagacggtgttactggtggacgaggcacataat
ctggtcgatcgtggtcgaacgatgttttctgcggagctggagaaagccgtgttcctcgat
gtgaaaagggagttccaaacgctcgacagcagtgtgcctgctgccaaagccattgtggac
tatactggagccatcgataagtatctgattacccttcggaagaacggcggagaagaagga
aagatcattcaacaggaggcgccagaggagctgattgaacgactggagccttttgtcatg
gtcgcggagcaatgtctggttgaagggggttcagggaatgccgagacggatcagctgctg
ctggatgcctatttcacggcacagaattttctgcgtattgccaagctgtacgatgaacgt
ttcatcacctatgcagagtgcgttcgaagtgaagtgcgagtgaagctattctgcctcgat
ccttcggtactgcttcgtcagacagccaaaggattccgctcccttattcatttctcagct
acattgtcaccccttcgctattatcgggatatgctgggtgcagaggaagaagattataca
ttgcagattccctcaccattccagcgtgaacagttggatgtgagactcatgcccttatcc
gtgcgttataaagacagggagcaatcccggcgtcccattgcggagatgctgcaacagctg
gtaagtgaatggccgcgcagcaatctgatggtgtttttcccttcgtatccttatatgcgc
gagatctatgacacctatgcacagcttccaagtgaagcagatacggtcatacagaagcag
ggcatgaacgaactggaacgggagcagttcctggaaggattccagccgaaccctgaacga
acacgattggtgtttgctgtcatgggtggtgtattctcggagggtgtcgatctgccggga
gaccgcttgaatggcgtggttgtagtaggtgcggggctgccgcagattggcctggagaac
aacgtactacgtgattactatgaccggactggacgcaacggattcaactatgcctatatt
ttcccggggatgaacaaggtgttgcaggcgggtggacgactgattcgaacggaagaggac
aagggtgtgctcgtgctggtggacgaccgttttatccaagaaccgtatcgttccctgctg
cccgaagagtggcgggactataagcgaatctga
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integrated database retrieval system
