Paenibacillus amylolyticus: P9222_08435
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Entry
P9222_08435 CDS
T09036
Name
(GenBank) sigma factor-like helix-turn-helix DNA-binding protein
KO
K24072
positive control factor
Organism
pamy
Paenibacillus amylolyticus
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamy03021
]
P9222_08435
Transcription machinery [BR:
pamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9222_08435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_r4
HTH_23
HTH_Tnp_Tc3_1
Sigma70_ECF
UPF0122
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WFR64186
LinkDB
All DBs
Position
1723221..1723685
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AA seq
154 aa
AA seq
DB search
MSTTTKATWIETLISQYSTDSRTLDKYRKSLDLDEPQEAEEAKKVSEMLSDMRYALTWLK
RGRRPGSRRGVEITDVYRQREIYIKLSGQEITDAERLRLVDALLALSDRERTCFLLHMAQ
GLTLLEISSKLSLSKRSVQEYVTRAKDKISKEFL
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacgaccaaagcaacgtggattgagacactgatcagtcaatattcaacggat
tcccgaaccttggacaaataccggaagagtctagatctggacgaaccccaagaggctgag
gaggccaagaaagtctctgaaatgttatcggacatgagatatgccctgacgtggttaaaa
cgcgggagacggccaggcagtcgccgtggcgtcgagattaccgacgtgtatcggcagcgg
gaaatctatatcaagttgtctggacaggagatcaccgacgctgaacggctgcgtctggtg
gatgccctgctggcgttgagtgacagagagcgaacatgtttcctacttcacatggcgcag
gggttgacgcttctagagatttcgtctaaactaagtttatcaaagcggtccgttcaggag
tatgtgacacgggctaaggacaagatttcaaaagaatttttgtga
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integrated database retrieval system
