KEGG   Paenibacillus amylolyticus: P9222_11090
Entry
P9222_11090       CDS       T09036                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
pamy  Paenibacillus amylolyticus
Brite
KEGG Orthology (KO) [BR:pamy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pamy03021]
    P9222_11090
Transcription machinery [BR:pamy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     P9222_11090
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 HTH_50 Sigma70_ECF GerE HTH_38 HTH_28 KORA TnsD HTH_Tnp_ISL3 Cyclophil_like2 HTH_24 HTH_10 HTH_29 DUF1492 MarR MarR_2 DUF7876 Phage_antitermQ HTH_31 HTH_3
Other DBs
NCBI-ProteinID: WFR64609
LinkDB
Position
2249516..2250289
AA seq 257 aa
MNEKVTPPESMSEAIGLIWEYQQTQDNEIATVLIRKYEPMVKMAAGKIARNRPDLYEDLY
QTGQMALIRLLKQYDINLGIPFEPYAMKSMIGHMKNYLRDKSWYIQVPRRIKEKGALVQH
AIDELTVKLERSPGVNEIAEYLDLTAEETIEVLAGRECYHYVSLDSPLSQDDSAATLGEL
ISADVNDYDSVEKRMDLQQALGQLKEQEQQVLILAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNASML
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaatgaaaaagtgactcccccagagtccatgtctgaagctataggtttgatctgggaa
taccagcagacccaagataatgaaattgcaactgtcctcatccgcaaatatgaaccgatg
gttaagatggcagcaggtaaaattgctcggaatcgccccgacctatacgaagatttgtat
cagactgggcagatggccttgattcgtttgctgaagcaatacgatatcaatctgggcatt
ccgtttgaaccctatgccatgaagagcatgatcggtcatatgaagaactatttgcgtgac
aaatcctggtatatacaggttccccggaggattaaggaaaagggagcccttgtgcaacat
gccattgatgagttaaccgtgaagctggagcgctcacccggtgtgaacgaaattgctgaa
taccttgatttgactgcagaagaaacgattgaagttctggctggtcgtgaatgttatcac
tatgtgtcactggattctccgttatctcaggatgacagtgcagcgacattgggtgaactg
atcagtgcagatgttaatgactacgattcggttgaaaaacggatggacttgcaacaggca
ttgggacaattgaaagaacaagagcagcaggtacttattctagcattccaggatggccaa
tctcagcgggcaattgcccaaaaacttggcgtatcacagatgagtgtatctcggattcag
aagcgagctacagagaaattgaaacagatcatgtcgaatgcttcaatgttatga

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