Paenibacillus amylolyticus: P9222_13045
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Entry
P9222_13045 CDS
T09036
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pamy
Paenibacillus amylolyticus
Pathway
pamy03410
Base excision repair
pamy03430
Mismatch repair
pamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P9222_13045 (recJ)
03430 Mismatch repair
P9222_13045 (recJ)
03440 Homologous recombination
P9222_13045 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamy03400
]
P9222_13045 (recJ)
DNA repair and recombination proteins [BR:
pamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
P9222_13045 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P9222_13045 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
P9222_13045 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WFR64878
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Position
2634073..2636376
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AA seq
767 aa
AA seq
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MSRGVHNEKEAERFLHPDLNQMHDPYLLLGMSEAVPRIKLALEREEHILIYGDYDADGVS
STSLMIHLMRHLGASYDIYIPHRSNEGYGLHNHALDWAHQQGVSLIITVDTGISAVEQIA
YAATLGIEVIVTDHHEPPEILPEAFTLINPKLPGCPYPFKGLAGAGVALKLAQALIGEVP
GEWMEIAAIGTVADLMPLEGENRVIVSYGIESMRGSRLPGVSALLEISGVDQSQVTSINI
AFAMAPRINASGRLDHAGRAVSLLTTENLDEAHTLAGQLDLLNRERQQVVEGILQEATAQ
LEQKIELRSGSVPDVIVLAGEGWNVGVVGIVASKLLDRYYRPTLILGIDPESGVCKGSAR
SIEGLDIYEALTVNKHTLDHYGGHPAAAGMTLHRDQLKELEAGLNEFAATVLTEADFVPQ
RLADDECRISDVPLKVIQEIDRSQPFGMSNPSPRFVLRSVTVKETRTMGREKRHLKLVLE
QDGQQLETVAFGKGALAEFLLPGSVIDVMGELSINEWNGMRKPQLMLQDIHVPQVQVFDM
RGHTEPLNAMKHFLSSLEVHLRYKSGSVGAIVRKETDVSEGNSLYEPCLWVYDRKVGLFP
CNAAAQHYGQEQVRTLFVFDTPETPEQLDAMLALFSGAENIILLHGSGNRRDRLQMPSRD
LFKRIYMQVLKWKAEPVEEQEVTPVLSRQCGCSPRMITMMLDVFEELSFITRDNGKIAFV
DNPPKRELTASRHYQALENMAEIEQVMLDAATPQLTQWMISRMKGVS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgaggagtgcacaatgagaaggaggcagaacgttttttgcatccggatctgaat
cagatgcatgatccgtatctgctactcggcatgagtgaagctgtgcctcgaatcaagctg
gctttggaacgggaagaacacattctgatttacggggattatgacgcggatggcgtctcc
agtacatcgctcatgatccatttgatgcgtcatcttggggcttcgtacgatatatatatc
cctcatcgctccaatgaaggatatgggctacacaaccatgcgttggattgggcccatcaa
caaggcgtttcattgattattaccgtggataccgggatcagtgctgttgaacagattgcc
tatgcggcaacgcttggcatcgaagtcattgtgacagatcaccacgagccacctgaaatt
ttgccggaagcctttactctgattaatccaaaacttccgggctgtccttacccctttaaa
ggtttggcaggagcgggggtagccctgaaacttgcgcaggcattaattggggaagtgccc
ggtgaatggatggagattgctgccattggtacggttgccgatctgatgcctttggaaggg
gagaaccgggtcatcgtcagttatggaattgaatcgatgcgtggttcacgtcttcccggc
gtaagtgcattgcttgaaatcagtggtgtggatcagagtcaggtgacttcgattaatatt
gcttttgccatggcaccgcgtattaatgccagtggacgtttggatcatgccggaagagcg
gtatcacttctcaccaccgagaatctggatgaagcccatacgcttgccggccagctagat
ctattgaatcgggagcgccaacaagtcgtagaaggcatactacaagaagcaacggcacag
ttggaacaaaagatagagcttcgttcaggatctgttccagatgtaatcgtattggctggt
gagggctggaatgttggcgtagtgggtattgtggcttccaaattgctggaccgatattat
cgacctacccttattctagggattgatccagagagcggtgtctgcaaagggtctgcgcgc
tctattgagggcttggatatctacgaggcactcacagtcaataaacacaccttggatcat
tacgggggccacccggctgcagcaggcatgacgctgcatcgggatcaactgaaagaactt
gaggcaggcttgaatgagtttgccgcaaccgtgttgaccgaagcggattttgtaccacag
cgtctagcggatgatgaatgcagaatcagtgatgttccgctgaaagtgatccaggagatc
gacagatcgcagcccttcgggatgagcaatccttcgccacggtttgtattgagaagtgtg
actgtgaaggaaaccagaacgatgggacgagagaaacgccatctgaaactggttctggag
caagatggtcagcaactggaaacggtggcttttggcaagggagcgttagcggagttcctt
ctcccgggttccgttattgatgtgatgggagaactgtccatcaatgaatggaatgggatg
agaaaacctcaattgatgcttcaggacattcatgttcctcaggtacaagtgtttgatatg
cgtggtcataccgagccattgaatgcgatgaagcatttcttgagctcccttgaggtgcat
ctacgatacaaatcaggttctgttggtgctatagttcggaaagaaacagatgtttccgag
ggaaattcattgtatgaaccttgcctttgggtatatgatagaaaggtcgggttatttccg
tgtaatgctgccgcgcagcattatggacaggaacaagtccggacgttatttgtgtttgat
acgccggaaaccccggaacaacttgatgctatgctggctttgttcagtggagctgagaat
atcatccttctgcacggatcaggcaaccgccgagatcgccttcagatgccttccagagat
ctctttaagcgtatttatatgcaggtgttgaaatggaaagctgaacccgtggaggaacaa
gaggttactcctgtgctcagtcgtcagtgtggttgttcgccgcgcatgattacaatgatg
ttggatgtattcgaagagttatccttcattactcgtgataacggaaaaattgcgtttgtg
gataacccccctaaacgtgaactaaccgcttcacgtcactatcaggcgctcgaaaacatg
gccgagattgaacaggtgatgctggatgcagccacaccgcaactgacacaatggatgata
tcccggatgaagggcgtatcttag
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