Paenibacillus amylolyticus: P9222_13120
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Entry
P9222_13120 CDS
T09036
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pamy
Paenibacillus amylolyticus
Pathway
pamy03420
Nucleotide excision repair
pamy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P9222_13120
03430 Mismatch repair
P9222_13120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pamy03400
]
P9222_13120
Enzymes [BR:
pamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P9222_13120
DNA repair and recombination proteins [BR:
pamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P9222_13120
MMR (mismatch excision repair)
Other MMR factors
P9222_13120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
SLFN-g3_helicase
Mg_chelatase
DEAD
ResIII
NACHT
Catalase_C
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WFR64889
LinkDB
All DBs
Position
2653310..2655496
Genome browser
AA seq
728 aa
AA seq
DB search
MSDSFQSAYQEEEYRLERTMEEVDSQLERLQNIPVYTGHDFTEQVLEAGREERRTALSKS
AQQPYFGRLDFEEQGSGARKPLYIGKVGVDREEVGEHPLVIDWRAPVASLFYSFTGGEAS
ATYEAPEGLIEGLVYLKRNVVIRQRILERVADTYNRDSDQPAVSDEFLVYRLGENKDNKL
RDIVSTIQAEQDLIIRAARNTALIIQGVAGSGKTTVALHRFAFLLYQYKEQVSAEKMVIF
APNHMFLDYISDVLPELGVGDIQQRTFPDWAMNLLGLEMPLANTSDTLNTWFETPDARPE
LNDDVPGRYKGSIRFMELIREWLSGMEADSVPDMDFSPWDGKVLGKTEIENWFGEEYKHY
PLAKRKERVMARVHRWIEMELKKPMPEAVRKERKKKATTREKAYAKKWPQYEPLTLYKQL
FKVAKGGSVPASLSGLIPKMVMKQTAADLKQDIVREEDLPALVYIHTLVHDIEGSERFDH
VVIDEAQDFSPFHVALLDQFVKGHSFTILGDLSQGIHEYRGVHAWDEMSSLFPEEQNAYF
ALTRSYRSTMEIIDYANTILERGVKSGITAIPVFRSGDPVRTLAYGGGGRTASLEAALKV
LTVKDYRTVSILTRTLHEAEELHRELQAAGWDLNLIDGGKKQYTGGHSVLPVYLSKGLEF
DAVIVADADQKHYLPNAGDAKLLYVGCTRALHELWLFHDGELPIYAAATHNPEGEPVTIQ
GWPESGSL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagctttcaaagtgcctatcaagaagaagagtacaggttagagcgaacgatg
gaggaagtggacagtcagttggaacgactgcaaaatattccggtgtataccggccacgac
ttcacagagcaagtgctggaagctggacgcgaagagcgccgcaccgccttatccaagagc
gcacagcaaccctatttcggacgcttggatttcgaagaacagggcagtggtgcacggaaa
ccgctgtatattgggaaagtcggcgtagaccgcgaagaggtgggagagcatccgctcgtc
atcgactggcgtgctcctgtcgccagcctgttttactcatttacgggaggcgaagcctcc
gctacgtatgaagctcccgaagggcttattgaaggtctggtgtacctgaagcgaaacgtt
gtcattcggcagcggatattggaacgtgtggcggatacatataaccgtgacagtgaccag
ccagcggtatcggatgaattcctcgtttatcgtctgggagagaacaaggacaacaaactc
cgtgatatcgtatccacgattcaggcggagcaggatctgatcattcgtgcggcgagaaac
accgcattgatcattcaaggtgtagcgggttccgggaaaacaacggttgccttgcatcgg
ttcgcctttttgctgtatcagtacaaggagcaggtatctgcggagaaaatggttattttt
gcacccaaccacatgttcctggattacatctcggatgtgctcccggaactcggagtaggg
gacatccagcagcggacattcccggattgggcgatgaacctgctggggctggagatgcct
ttggcgaatacatcggatacgctcaacacctggttcgaaacaccagatgcgcggcctgaa
ttgaatgatgatgtacctggacgttacaaaggatcgattcgtttcatggagcttattcga
gaatggctgtcggggatggaggcggattccgtaccggatatggacttcagtccatgggat
ggcaaggtgctcggcaagacggagatcgagaactggttcggtgaggaatacaaacattat
ccgctggccaaacgcaaagaacgggtcatggcgcgggttcaccgctggattgagatggaa
cttaagaaaccgatgccggaggctgtccgcaaagaacgcaagaaaaaagcaaccacccgc
gagaaagcctatgccaaaaaatggcctcaatacgagccgcttacgttatacaagcagctg
ttcaaagtggcaaagggcggctctgtgccggcctcgctcagcgggcttattcccaaaatg
gtcatgaaacaaacggcagcagatctgaagcaggatatcgtccgtgaagaggatctgcct
gcactggtatacattcatacattggtccatgatattgagggttcggagcggttcgatcat
gttgtaattgatgaagcgcaggacttttccccttttcatgtggcgttattggatcagttc
gtcaaagggcattccttcaccatactgggtgacttgtcccaagggattcatgagtaccgt
ggtgttcatgcatgggatgagatgagttctctgtttcctgaggaacagaatgcatacttc
gcattgacgagaagttatcgttcaacgatggagattatcgactatgccaatacgattctg
gaacgtggcgtcaagagcggaattacggcgattcctgttttccgtagtggtgatccggtg
cggacgttggcttatggaggcggagggcggacggcgagtcttgaagcggctttgaaggtg
ttaaccgtcaaagactaccgaacggtctccatcctgacccgtaccctgcatgaagccgag
gaacttcatcgtgaacttcaggccgcaggctgggacctgaacctgatcgatggtggcaaa
aagcagtacacaggtggacattccgttttaccagtctatctgtccaaaggcttggagttt
gatgccgttattgtggcagatgcagaccagaagcattatctgccaaatgcgggtgatgca
aaactgttgtacgtgggctgcacacgggccttgcacgaattgtggctcttccatgacggt
gaactgccgatctatgccgctgcaacacataatcccgaaggtgagcctgtaaccatccag
gggtggcctgagagtggctctctataa
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