Paenibacillus amylolyticus: P9222_31785
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Entry
P9222_31785 CDS
T09036
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pamy
Paenibacillus amylolyticus
Pathway
pamy02020
Two-component system
pamy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P9222_31785 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P9222_31785 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamy03021
]
P9222_31785 (rpoN)
Transcription machinery [BR:
pamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9222_31785 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
WFR62671
LinkDB
All DBs
Position
complement(6513190..6514494)
Genome browser
AA seq
434 aa
AA seq
DB search
MLGVQLVQEQRIRLSITPEMKQSFHLLTMSGQDLTRYLLDAAEENPILELEEPAVPLARI
PRRMDQRRYDSYDPLLQVKGEEPTLEQLLIAQIRVMTLPEQLEHMAVYMAGCVNDDGYLT
VELAEVQAALEFPMSEVTAGLELLQSLDPAGVGARNLQECLLLQIRRDPSAALHAEQMVE
AGLEALVPFHPGRTGSRLGLTSRDAQVAYDYITGLDPKPCRSIGCTERPHYIIPDAIVGL
CNGEAQFSLHAAGNPRVSMNEACIRWIREKAPDEIWSTRAAEARAIIRSVHLRRRTLVRV
LAAVMAEQRSFLEKGPSALKPLNLAVIAENIGMHESTVSRAVSGKYIHTPYGVYELRAFF
ASGISTTSGDKTSASAVKRRLKEIIRTEQTQRPYSDSRLTTLLAEEGIVISRRTVAKYRE
ELQILPSLERKRWA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttaggtgttcagttggtgcaggaacaacgtattcggctgtccatcacgccggagatg
aaacaatcctttcatttgctaaccatgtccggtcaggatctgactcgttacttgcttgat
gcggcggaggaaaatccaattcttgagctggaagaacccgctgtacccctcgcccggatt
ccgcggcgaatggaccaacgcaggtatgattcctatgatccgctgcttcaggtgaaaggt
gaagaacctacactggaacaattgctgattgcgcaaattcgagtaatgacacttccagaa
caattggaacatatggcagtatatatggcaggatgtgtaaatgatgatggttatctgacg
gttgaactggcagaggtgcaagcagcgcttgagtttccgatgagcgaggttacagcagga
ctggagcttctccagtcgctggaccctgctggggtaggagcacgaaatctgcaggaatgt
ctgttgctgcagatccgacgtgatccatcggctgcccttcatgcggagcaaatggtggaa
gcgggattggaagcactggttccttttcacccaggcagaacagggagtcgattaggcctg
acttcacgggacgctcaggttgcctatgactatattacaggtcttgaccccaagccctgt
cgatccatcggatgtacggaacgtccacattatattattccggatgccattgtcgggctg
tgtaacggtgaggcccagtttagcctgcatgcggcaggtaaccctcgtgtatcgatgaac
gaagcgtgcattcgctggatcagggaaaaggcgcctgatgagatatggtctactcgcgcg
gcagaggcgagggcgatcattcgtagtgtacacctgcggcgcaggacattagtgcgtgtg
ctggcggctgtcatggcagagcagaggtcctttttggagaaaggcccgtccgcgctaaaa
ccgctgaatctggctgtgattgcagagaacattggcatgcatgaatcaacggtaagtcgt
gccgttagtggtaagtacattcatactccttatggtgtatatgaactcagagcttttttt
gcctcgggaatcagtacaacgtcaggggataaaacatcagcatcagcggtgaaacgaaga
ttgaaagaaatcattcgcacggaacagacgcagcggccttactcggatagtcggttgacc
acattgcttgccgaggagggaattgtcatctcccgcagaacggttgccaagtacagggag
gaacttcagatactaccttccttggagcgtaaacgatgggcttaa
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