Paenibacillus amylolyticus: P9222_33205
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Entry
P9222_33205 CDS
T09036
Name
(GenBank) sigma factor-like helix-turn-helix DNA-binding protein
KO
K24072
positive control factor
Organism
pamy
Paenibacillus amylolyticus
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pamy03021
]
P9222_33205
Transcription machinery [BR:
pamy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9222_33205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
HTH_23
Sigma70_r4
HTH_10
HTH_29
Sigma70_ECF
HTH_28
HTH_24
HTH_Mga
HTH_11
UPF0122
Terminase_5
HTH_3
wHTH-PRTase_assc
HTH_40
HTH_38
HTH_Tnp_Tc3_1
HTH_17
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WFR65738
LinkDB
All DBs
Position
unnamed2:complement(343..666)
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AA seq
107 aa
AA seq
DB search
MLSDMRYALTWLKRGRRPGSRRGVEITDVYRQREIYIKLSGQEITDAERLKLVDALLALS
DRERTCFLLHMAQGLTLLEISSKLGLSKRTVQDYVDRAKDKISKEFL
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgacatgagatatgccctgacgtggttaaaacgcgggagacggccaggcagc
cgccgtggcgtcgagattacggacgtttatcggcaacgggaaatctatatcaagttgtcc
ggacaggagatcaccgatgcggagcgtctgaagcttgtggatgcgttactggccttgagt
gatcgggaaagaacctgtttcttgcttcacatggcgcaaggcttgacgcttttggaaatt
tcgtctaaactaggtctaagtaagagaacggttcaggactatgtggaccgggcaaaagac
aagatttcgaaagaatttttgtga
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