Paenibacillus amylolyticus: V6668_27395
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Entry
V6668_27395 CDS
T11921
Name
(GenBank) response regulator transcription factor
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
pamy Paenibacillus amylolyticus
Pathway
pamy02020
Two-component system
pamy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pamy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6668_27395
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6668_27395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pamy02022
]
V6668_27395
Two-component system [BR:
pamy02022
]
NarL family
DegS-DegU (multicellular behavior control)
V6668_27395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
XFP_C
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WWP23793
LinkDB
All DBs
Position
complement(6197962..6198684)
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AA seq
240 aa
AA seq
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MENRDTGKASIKVLLADDHQLFREGLKRILNMEDDIEVIGECGDGIQVLEFCNQDKPDIV
LMDINMPIENGVEATEKLRELFPDVKVIILSIHDDESYVFETLRKGANGYLLKDMEAESL
INAIRSVHEGHAFIHPKVTGKLIMQLRRMTYLNETGAMSEGASKEAGVKFVAGDNNPLTR
REAEVLRLMAEGKSNKMIGEFLFISEKTVKNHVSSILQKMEVDDRTQAVINSIKYGWVTL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccgtgatactggtaaagcatcgattaaagttcttttggctgatgatcatcag
ctgttccgtgagggactgaaacgcattttaaatatggaggacgacattgaggtcatcggt
gaatgcggcgatggtattcaagtgctcgaattctgcaatcaggataaacctgatatcgta
ttgatggatatcaacatgccgatcgaaaacggggttgaggcaacggagaaattacgtgag
ctgttccctgatgtcaaagtaattatcttgtccattcatgatgatgaaagttatgtattt
gagacgcttcgtaaaggggctaacggatacttgctgaaggatatggaggcagagtctctg
atcaatgcgattcgttccgtgcatgaaggacatgcgttcatacatccgaaagtaacaggc
aaactgatcatgcagctgcgtcgtatgacgtatcttaatgaaacaggggcaatgagtgaa
ggagcttcgaaggaagccggtgttaaatttgtcgctggcgacaataacccgctcacacgt
cgtgaggctgaagtgcttcgcttgatggcagaaggtaagagcaataaaatgattggtgaa
ttcctgttcatcagtgaaaaaacagtaaaaaaccatgtcagcagtattctgcagaagatg
gaagtggacgaccgtacgcaagctgttatcaattcgatcaaatatggttgggttacgctc
taa
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