Paenibacillus sp. M2: ACETMN_11950
Help
Entry
ACETMN_11950 CDS
T11574
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pamz Paenibacillus sp. M2
Pathway
pamz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pamz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACETMN_11950 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pamz03019
]
ACETMN_11950 (pnp)
03016 Transfer RNA biogenesis [BR:
pamz03016
]
ACETMN_11950 (pnp)
Enzymes [BR:
pamz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACETMN_11950 (pnp)
Messenger RNA biogenesis [BR:
pamz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACETMN_11950 (pnp)
Transfer RNA biogenesis [BR:
pamz03016
]
Prokaryotic type
tRNA degradation factors
ACETMN_11950 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XMN17143
LinkDB
All DBs
Position
2574195..2576297
Genome browser
AA seq
700 aa
AA seq
DB search
MEQRVEMQLGGRKLTLETGRLAKQANAAVKVTYGDTVVLCTVTASSEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNIVMSVDQD
CEPQIAAMIGTSAALSISDVPFSGPIGGVKVGRIDGEFIINPTIAQLEVSDIELVVAGTK
NAIMMVEAEANEVPEEVMLEAIMFGHDEIQNIIAVIEQLVQVAGKEKMAVKLRTVNAEVN
SSVREFASARLVEAVKIAEKHARQDAIDVVNDETVAHFEEKYIESPELFKDVKEVLHDIV
KEEVRRLITHDKVRPDGRGLDEIRPIECDTSLLPRAHGTGLFTRGQTQALSVCTLGALGD
VQILDGISLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETDF
PYTIRLVSEVLESNGSSSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGDHVSILSDI
QGMEDHLGDMDFKVAGTPEGVTAIQMDIKIAGINRQILSDALAQAKEGRMHILGKMNEIL
KTPREQLSQYAPKITTMHINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
QEMNDKAKAIIEGIVREVLVGEIYVGKVKRVEKFGAFVEVLPNKEGLVHISQLSTERVAK
VEDVVAIGDSITVKVTEIDPQGRINLSRKAVLTAEAPAQS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcgtgttgaaatgcagcttggtggaagaaagcttacgcttgagaccgggcgt
ttggccaagcaggctaatgctgccgttaaggtaacatacggggataccgtggtattgtgt
accgtgacagcatcaagtgagccgaaagatctggactttttcccattaacggtgaactat
gaagaaagattgtacgccgtaggtaaaatcccgggaggatttattaaacgtgaaggcaga
ccgagtgagaaagcgattctttcaagccgtctgacagaccgtccaattcgtcctttgttc
ccggaaggcttccggaatgatgtacaagttctgaatatcgttatgagtgtggatcaggat
tgcgaaccgcagatcgctgcaatgattggtacatcagcagcattgagcatttcggatgtt
ccattcagcggaccgattggtggcgtgaaagtgggtcgtattgatggcgagttcatcatt
aacccaacgattgcacagcttgaagtcagtgatattgaactggtcgttgcaggaaccaaa
aatgccatcatgatggttgaggccgaagctaacgaagtgccggaagaagtgatgctcgaa
gcaatcatgtttggacatgatgagatccaaaatattattgctgtaatcgaacaacttgta
caagttgctggaaaagaaaaaatggctgttaagttgcgtaccgttaatgctgaagttaac
agcagtgtgcgtgaattcgcgagcgctcgtctggtcgaagcggttaaaatcgccgagaag
catgctcgtcaagatgcaatcgatgtagtgaatgacgaaaccgttgctcactttgaagag
aaatatattgaaagtccggaattgttcaaagacgtgaaggaagttctgcatgacatcgtc
aaagaagaagtccgccgtttgatcacgcatgataaagttcgtccggatggacgtggactt
gatgaaattcgcccaattgaatgtgatacatctctgctgccacgtgcacatggtacagga
ctgtttacgcgcggtcaaacgcaagcacttagcgtttgtacacttggtgcactgggtgat
gttcagattttggacggaatcagtcttgaagaaacgaaacgtttcatgcatcactataac
ttcccaccattcagcgtaggcgaagcgcgtccattgcgtgctccgggtcgtcgcgaaatc
ggacatggtgcactgggtgagcgcgctctttccaaagtgatcccttccgaaacggatttc
ccgtacacgattcgtttggtatctgaagttctggaatccaacggctcatcatctcaggca
agtatctgtgccagcactttagctatgatggatgcaggtgttccaatcaaagctccggtt
gcgggtgtggctatgggtctgatcaaagatggtgaccatgtatccattctgagtgatatt
cagggtatggaagatcacctgggtgacatggacttcaaggtagcaggaacacctgaaggt
gtaaccgcgattcaaatggacattaaaattgctggtattaatcgtcaaattttgtctgat
gcattggcgcaagccaaagaaggtcgtatgcacattttgggcaaaatgaacgaaattttg
aaaactccacgtgagcagttatcacaatatgcacctaaaattacaacgatgcatatcaat
ccggacaaaatccgtgatgtgatcggtgcaggtggtaaaattatcaataaaatcatcgaa
gaaaccggtgttaaaattgatattgaacaggatggacgtgtctttatcgcttcttccaac
caggagatgaatgataaagccaaagcgatcatcgaaggtattgtgcgcgaagtattggtc
ggcgagatttatgtcggcaaagtaaaacgcgtagagaaattcggtgcatttgttgaagta
cttccgaacaaagaaggtctggtacacatctcgcaactgtcaactgaacgtgttgccaaa
gtggaagatgttgtagctatcggtgattccattacggtaaaagtaacggaaattgaccca
caaggtcgaatcaacttgtcccgtaaagcagttttgactgctgaagctccggctcaatct
tag
DBGET
integrated database retrieval system
