Podospora anserina: PODANSg09612
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Entry
PODANSg09612 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
pan
Podospora anserina
Pathway
pan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PODANSg09612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pan03021
]
PODANSg09612
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg09612
Transcription machinery [BR:
pan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PODANSg09612
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PODANSg09612
U7-dependent histone pre-mRNA processing factors
PODANSg09612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Peptidase_S8
Motif
Other DBs
NCBI-GeneID:
6196835
NCBI-ProteinID:
XP_001912563
UniProt:
B2AAD3
LinkDB
All DBs
Position
1
AA seq
856 aa
AA seq
DB search
PTFVAQRLLSLRAFCLLPTSTYYHTIRPSPSLSCRIINFIPHCPTKKKVGRSLCVGEGGF
LIRQHTKNKQQSTEAQDHIIPTMASTPAVPIEEQLKQLNAARKLALENSAYYDRIVKGVL
PVIGPTSSIELKRWGAEFLAESLATPVLSMRDKESLTLSVLDTLKSLLESEQDDAIVLKA
SIAAAASAYPVVLRWIIHNSYHTEAWEQTSAIKSRILRIWDGAPAPVRLSCIKFAQRVVL
AQTTSNGQEVKYGGLDISLGMVPANHPLLDPRLMEAEATGLLDRMLGVLQDNSNDALLVD
ATLNCLSILIRTRPSTSNRIINCVLNFNPLKLANSPMTPKNKVLMKSMEKTTRMLMINIL
KRHVSSRDPNNQHSGRVQQYVERLMRSRAEIFDEAGRKRQLADQAAAQYGDLKRQKMQDA
SAAAPEPAAPAQPAVIPPLAPGPQTLAAVFTLTNNPGLQAFDATSIPANLVAKIVARTLN
TLDQSVLDFAVNGIRSRLHTLQAAAVTAAAQYAAHGAAGLPGAINPATAPLGVEEDDDDY
EPNLDAAEDTEQILNKLDNAPPETALDEYADPNAALGLGPFTLAPPPLIDADVASKLSSA
AASRLFGPLSSLSSEGPSKKPKAGINRLAASSYDRDSWLTVATRLATRSTFGLEEEEQEE
EQTSAVKSEEGAVSHPLASTFNQSIREMLFTYILEDWRPRIEVAVAWLSEEWYNDQLTKR
TGLRNAPLHYETWALRLLDGFMTFITAQDKVLTRFLAEIPELSGELLGRLKTLCGDPNTL
GLAMTSLLYLVMMRPPARELALDTVGGIWVEYEEARPLAAKYLSKWRPGWVEQQMHLQAA
KAVAGGGGNGAAGIAA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
ccaacctttgttgcccaacgacttctttctctccgcgccttttgcctcctacccacatct
acatactatcataccatccgtccgtccccttcgctatcctgccgtattatcaacttcatc
ccacattgccccaccaaaaagaaggtcggtcggtcgctctgtgtgggagagggcggtttc
ctgatacggcaacacaccaaaaacaaacaacaatcgaccgaggcgcaagatcacatcata
ccgaccatggcttctacaccagctgtccccattgaggagcagctcaagcaactcaacgct
gctcggaaattggccttggaaaactcggcttactacgaccgcatcgtcaagggtgtttta
cctgtcatcggaccgacatcatcgatcgaactcaagagatggggagctgagtttctggcc
gagtcgctggccactccagtgctttcgatgcgcgacaaggagagcttaacgctctcggta
cttgacacgctcaagtcgttattggagagtgagcaggatgatgcgattgtgctgaaggct
agcattgctgccgcggcgagcgcgtacccagttgttttgaggtggattattcacaacagc
tatcacacagaggcttgggaacaaacctcagcgataaaatcgaggatcctcaggatctgg
gatggagccccggcccccgtcagactaagctgcatcaagtttgcgcagcgtgttgtgctc
gcccaaacaacgtccaacggccaggaggtcaagtatggtggactcgacatttcgctgggc
atggtaccggcgaaccaccctttgctagacccacgactgatggaggcagaggctactggc
cttctcgaccggatgttgggggtgctacaggataacagcaacgatgctctccttgtcgat
gcgaccttgaactgtctttcgatcctgatccgaaccaggccaagcacttcgaaccgcatc
attaattgtgtgctcaactttaaccctctcaagttggccaactcgcccatgacgccgaaa
aacaaggtgctcatgaagtcgatggagaagacgacccggatgctcatgattaatattttg
aagaggcatgtgtcgtctagggatcccaacaatcaacacagcggccgtgtccagcagtat
gttgagcggttgatgcgctctcgcgccgagatattcgatgaagcgggtcggaagagacag
cttgctgaccaagcggctgcccaatatggcgatctcaagagacagaagatgcaggatgct
tctgctgccgctcctgaacctgccgcgccagcacagccagccgtgatcccgccattagca
ccaggacctcagactcttgctgccgtcttcacgttgaccaataaccctggtctccaggcc
tttgatgctaccagcattcccgccaacctagtggccaagattgtggctaggacgctcaat
actctggaccaaagtgtcttggactttgcggtaaacggtataagaagtcgtcttcacact
cttcaggctgctgcggtgacggcggcagcccagtatgccgcccatggagctgcgggttta
cctggtgctatcaaccctgctacggcacctttgggagtggaagaggatgacgatgattac
gagcccaaccttgacgcggcggaagatacggagcagattctcaacaagctcgacaatgca
ccccccgagacggcgctcgacgaatatgccgatcccaacgctgccctcggcctcggccca
ttcaccctcgcaccaccacccctgatcgacgccgacgtggcctccaaactcagctccgcc
gcggcctcccgcctctttggccctctatcctctttatcatcagaaggcccaagcaagaag
ccaaaagcgggcatcaaccgccttgccgcctcgtcgtatgatcgcgattcctggctcacc
gttgccactcgactcgccacccgcagcacattcggcctcgaagaagaagaacaagaagaa
gaacaaacctcggcagtcaaatccgaagaaggcgccgtctcccacccgttggcctccacc
tttaaccaatccatccgcgagatgttattcacctacatactcgaagactggcggccgaga
atagaagtcgcggtcgcgtggctcagcgaggagtggtacaatgaccagctcaccaagcgg
acggggctgaggaacgcgccgctgcactacgagacgtgggcgctgaggttgctggacggg
ttcatgacttttatcacggcgcaggataaagtcttgacgaggtttttggccgaaattccg
gagctgagcggggagttgcttgggaggctgaagacgctgtgtggggatccgaatactttg
ggcttggcgatgacgagcttgttgtatcttgttatgatgaggccacctgcgagggagttg
gcgttggatacggttggggggatttgggttgagtatgaggaggcgagaccgctggctgcg
aaatacttgagcaagtggcggccggggtgggttgagcagcagatgcacttgcaggctgcg
aaggctgtggctgggggtggtgggaatggggctgctggtattgctgcttag
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