Podospora anserina: PODANSg1374
Help
Entry
PODANSg1374 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K18716
nucleoporin NUP42
Organism
pan
Podospora anserina
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg1374
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PODANSg1374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Babuvirus_MP
DUF4633
Motif
Other DBs
NCBI-GeneID:
6188492
NCBI-ProteinID:
XP_001904355
UniProt:
B2AFB6
LinkDB
All DBs
Position
5
AA seq
693 aa
AA seq
DB search
MDSTSHIHIQSWVAPTFAKLQGCGKAENSCHRAALSTKRVFEKSKSVATNKPRQNDTTTS
WYSNSILHPETTGIMTVCKYFQQGNCRFGSRTNHCLSFSLTTIASPQSLSLASTTAEFTL
DHNCRFEHPRDGGSSQSPFGGGGNRFSALSGGQQGAFGGSKQSDQPEYAGLNEETIRKDL
QNELPQWIFSCYGPGKDAPDNLFGGYPREQQPEELRIHFMKGQAAGEAEAAMNEIMQLHQ
VARQQIEHTLSNVPAAIQHVRDGINRHPNRHDICKQGTAGNTGTTFGQPAPNAFQSSQPA
SNPFGATAQPAAGGFGQPAALGQKPNPFGAPAFGQPAQPAATPSPFGQPAAPSAFGKPAA
LGASNPFGKPASSGFGQPSALGGGNKVFGQAAAPAFGQSGFGQTTPAPSAFGQPAGLGAT
PSPFAAATAAANTAQQNPNPFGQPAQNPSPFGAPAPPAANGFGQPAATPSPFGAPAAAPA
SNPFGAASQPAQNTPSPFGQPAAPAANPFGQPAPAAAAPSPFGAPTAPTATPSPFGAPAA
TTAAPSAFGQPATAPAPSPFGGTTATAPQPTPQQGGGPYGPGATRSHPPLSSYASKNPDN
TLGMFKGRPVMYEVVKSQGEKPIPVIRGFDGSIQKIWNPNGAPNYTAETEAEPEKYNDPT
VQRQWMMFVETGRFENGIMPEVPPKREFCVWDF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaccagccacatccacatccagtcttgggtggctccaaccttcgccaagctg
caaggctgcgggaaggctgagaattcatgccaccgcgccgctctctctaccaaacgcgtt
tttgagaagagcaagtcagttgcgaccaacaaaccacgacaaaacgacacaaccacgtca
tggtacagcaatagtatcctacaccctgaaacaaccggcatcatgacagtttgcaaatac
tttcagcagggaaactgccgctttggaagtaggacgaatcactgcctctctttttctttg
acgacgatcgcctcaccacaatcgctttccctcgcaagcaccactgccgaattcactctc
gatcataactgcaggtttgagcatccaagagacgggggttcgtctcagtcaccgtttggc
ggcggtgggaacagattcagcgccctttctggaggacagcagggcgcatttggggggtct
aaacagtcagatcaacccgagtacgccggcctgaacgaggaaacgattcgaaaagacctt
cagaacgaactaccacaatggatattctcctgctacggcccgggcaaagatgcgccagac
aacctgttcggcggctacccccgtgagcagcaaccagaggagctcaggatacatttcatg
aaaggtcaggcagcgggggaggcagaagcagccatgaacgagattatgcaactgcatcaa
gtagcacgacaacaaatcgaacacacgctgagcaacgtacccgccgctatccagcacgtt
cgtgacgggatcaacagacatccaaatcgtcacgacatatgcaaacaaggaacagcgggc
aacactggaacaacgttcggacagccagcgccaaatgctttccagagctcacagcctgcc
tcgaatcccttcggtgctaccgctcaacccgctgctggaggttttggtcagccagctgcg
ttgggtcagaagcccaacccattcggtgcgccagcctttggacagccagcccaaccagcc
gctaccccatcaccctttgggcaaccagctgcaccgtcggcctttgggaagccagccgcc
ctgggagcaagcaatccttttgggaagccagcatcaagcggttttggccagcccagcgcc
ctagggggtggcaataaggtctttggccaagccgcagcaccggcatttggtcagtcagga
tttgggcagacaacaccggcaccgagcgcttttggtcaaccagctggtttgggcgccacg
ccaagcccatttgctgctgccactgccgccgcgaacaccgcccaacagaatcccaatcca
tttgggcagccagcgcaaaacccatcaccttttggggcaccggcaccccctgctgccaat
ggctttggccagcccgccgcaaccccaagtccattcggagctccagcagcggctccagca
tcgaaccccttcggggcagcttctcagccagcacaaaacacaccctctccgttcgggcaa
ccagcagcccctgccgccaaccctttcggacagccagctcccgcggcggctgctccctca
ccatttggagcacccaccgctccaacggctactccctcgccattcggagctcctgccgcc
acgactgctgccccgagtgcgtttggccagcccgctactgcaccagcacccagccccttt
ggcggaaccaccgctacggcccctcagcctactccgcagcaaggggggggaccatatggc
cctggcgccactcgcagccatccccctttgtcgtcatatgcctcaaagaaccccgacaac
acccttgggatgttcaaaggcagacccgtcatgtatgaagtggtcaaaagccagggggag
aagcctattccggttatcagggggtttgacgggtcgattcagaagatttggaatccgaat
ggtgcgccgaattacacggctgagacggaggccgagccagaaaagtacaatgatccaacg
gtgcaacgtcaatggatgatgtttgtagagacgggaaggtttgagaacgggatcatgccg
gaggtaccgccaaagagggagttttgtgtttgggatttctaa
DBGET
integrated database retrieval system
