Podospora anserina: PODANSg1720
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Entry
PODANSg1720 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pan
Podospora anserina
Pathway
pan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PODANSg1720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg1720
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PODANSg1720
U7-dependent histone pre-mRNA processing factors
PODANSg1720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Ste5
Lactamase_B
Securin
Motif
Other DBs
NCBI-GeneID:
6188727
NCBI-ProteinID:
XP_001904698
UniProt:
B2AL57
LinkDB
All DBs
Position
5
AA seq
967 aa
AA seq
DB search
MFSFCPLQGALSESTASQSLLELDGGVKILVDVGWDETFAVEKLRELEKQVPTLSFILLT
HATVAHIGAYAHCCKHIPLFSTIPAYATRPVIDLGRTLTQDLYASTPLAATTIPTSSLAE
VAYASSQAPSLNPNLLLQPPSPEEITRYFANIQAVQYSQPQQPRSSPFSPDITNLTVTAY
NSGRTLGGAIWHIQHGLESIVYAVDWNQGKENVFSGAAWLSGGHGGGGSTEVIEQLRKPT
ALVCSSRTPDATLSRAKRDEQLLESIKLCIARGGTVLIPVDSSARVLELSYLLEHAWRNE
VDNNNNETFRNAQLYLAGHSIGSTLKHARSLFEWMDDKIVREFEAAAGGKESHSRGQRGG
HHHDHKVAGPFDFKHLRLLERKGQVSWVLKQALEDLEPKGRVILATDSSLEWGFSKEVLK
SIAGDARNLVLLTEKPALNENKPSIARTLWDWWKERKDGVATEQTTSGETFEQVYAGGRE
LEIADASKQALEGNDLSVYQQWLATKQQLQATSHGGSGMTWEAWTDLNDALSDTSTESEE
SETEQQGKALNISANIKQASRKKVVLNDEDLGVNILIKKRGVYDYEVRGKKGREAMFPAV
AQRRRHDEFGDLIRPEDYLRAEEREVADRQETDPAKTKQEDSLGKKRSLIAVNAANKATA
NSKREKQPARAHSDEPDDASATGAPGNGPHTEEVDELDEEEDAPVLGPAKLVMTTHKISV
NLRIAFVDFSGLHDKRSLHMLIPLIQPRRLVLVAGTEQESQALAADCKKLLSAQLAANSS
NESATVDVFTPPVGTFVNASVDTNAWVVKLSDYLAKKLKWQDVNGLGIATITGVLLPGGG
FIPSDDPNDEGNKRQKTEEGGSPSSSMALTTVNNDANPRTLPTVDVLPVNLAATATVKAA
SQPLHAGDLRLADLRRAMLHAGHKAEFRGEGTLLIDETVAVRKSAAGRTFYAVREKIYDV
LAVVPGA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcttctgcccattacaaggcgccctctccgagtccacagcatcacagtcgcta
ctcgaactcgatgggggtgtcaagatcttggtggatgttggctgggacgagacctttgct
gttgaaaagctcagggaactagaaaaacaagtcccgactctatcattcatcctcctgacc
catgcgactgtcgcccacatcggagcctatgcgcactgctgcaaacatatccccctgttc
tcaaccatccccgcctatgcgacacgcccagtcattgatctcggccgtaccctgacacaa
gatctctatgcctccaccccattagctgcgacgacaataccaacgtcctcactcgccgaa
gtggcctacgcatcatcccaggccccatcactgaaccccaacctgctgcttcagccacca
tcccccgaggagatcacacgatactttgctaatattcaggccgtacaatactcacaacca
caacagcctcgatcctcgccattctccccagacatcaccaacttgacagtcacagcttat
aattcgggacggacactcggtggagccatctggcacattcagcacgggctcgaatctatt
gtctacgccgtcgactggaaccaaggcaaggaaaatgtcttttcaggtgccgcttggctg
agcggtggacatggcgggggaggcagcaccgaggtcatcgaacaactccgaaaaccaaca
gctctggtgtgcagcagtcgaacacccgacgccaccctctctcgtgccaagcgtgatgag
caactcttggaatcgatcaagctctgtattgcgcgaggagggacagtcctgataccggtc
gattcaagtgccagagtcttggagctttcatatcttctagagcacgcctggaggaacgag
gtggacaacaacaacaacgaaacattcagaaatgcgcagctgtatctggccggtcacagc
atcggcagtactctgaagcacgccaggagcttgttcgagtggatggacgacaagattgtg
agggagtttgaagccgcggctggtggcaaggaaagccacagcaggggccagaggggcgga
catcatcacgaccataaggtggccggaccgttcgactttaagcacctgcggctgctagag
agaaagggacaggtttcgtgggttctcaagcaagcacttgaggatcttgaaccaaaaggc
cgggttattctagctacagattccagcctcgagtggggcttctcgaaggaggttctcaag
tccattgccggtgacgcaaggaatcttgttcttctaaccgaaaagccagcactgaacgag
aacaagccatcgatcgccaggacactctgggactggtggaaggagagaaaggacggtgta
gcaacagagcagaccaccagtggcgagacctttgaacaggtctacgccggtgggcgagaa
ctagagattgctgatgcgtcaaaacaggcgctggaaggtaacgatctcagtgtttaccaa
cagtggcttgcgacaaaacaacaactgcaagccacctcacatggcggaagtggaatgact
tgggaagcctggaccgacttgaacgatgctctctccgacacgtccaccgagtctgaggag
tcggagacggaacaacagggcaaagcactcaatatttctgccaacatcaaacaagccagc
cgaaagaaggtcgtcctaaacgacgaagacttgggtgtcaacatcctcatcaagaagcgg
ggtgtgtatgactacgaagtcaggggtaaaaaggggcgagaagccatgttcccagcagta
gcccaacgaagacgtcacgatgagtttggcgacctcatccgaccagaagactacctccgc
gccgaagagcgagaagtagccgacaggcaagaaaccgacccagccaagaccaaacaagaa
gacagcttgggcaaaaagcgaagtctcattgccgtcaacgccgccaacaaggccacggcg
aacagcaaacgggaaaagcaacccgcccgtgcccactcggacgagccagacgatgccagc
gccactggcgccccaggaaatggtccccacacggaagaagtagacgaactggacgaggaa
gaagacgcccccgtcctcggacctgccaagctcgtcatgaccactcacaagatcagcgtc
aacctccgcatcgcgtttgtcgacttttccggtctgcacgataaacgctcgctgcatatg
ctcatcccgctcatccagccccgtcggttggttctcgtcgcgggaacggagcaggaatca
caggctcttgcggctgactgcaagaagttgctttctgcgcagctggcggctaactcatcc
aatgaatcggcgacggtggatgtgtttacacccccggtggggacgtttgtgaatgcctcg
gtggacacgaacgcctgggtggtgaagctctcggattatctggccaagaagctcaaatgg
caggatgttaatgggttaggcattgctactattacgggtgtgctacttcccggagggggg
tttattccctcggacgaccccaacgatgaggggaataaacggcagaagacggaagaaggg
gggtcgccttcttcgagtatggcgttgaccacggtcaataatgatgccaacccgcgcacc
ctccctacggtggatgtgctaccggttaacctggcggctacggctacggtgaaggcggct
tcgcaaccgcttcatgcgggggatctgaggctggcggatctgaggagggcgatgttgcat
gctgggcacaaggcggagtttaggggggaggggacgctgttgattgacgagacggttgcg
gttaggaagagtgctgctgggaggacgttttatgcggtgagggagaagatttatgatgtt
ttggctgttgtgccgggggcgtag
DBGET
integrated database retrieval system
