Podospora anserina: PODANSg1982
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Entry
PODANSg1982 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
pan
Podospora anserina
Pathway
pan03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PODANSg1982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pan03021
]
PODANSg1982
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg1982
Transcription machinery [BR:
pan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PODANSg1982
RNA polymerase I system
PODANSg1982
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PODANSg1982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTD
KOWx_SPT5
KOW5_SPT5
Spt5_N
Spt5-NGN
KOW4_SPT5
KOW2_Spt5
KOW1_SPT5
KOW
Motif
Other DBs
NCBI-GeneID:
6189014
NCBI-ProteinID:
XP_001904960
UniProt:
B2ALM9
LinkDB
All DBs
Position
5
AA seq
1007 aa
AA seq
DB search
MADNHYGGDSESEDDNFNPAPADLSDEEQDANDSSPRVSRKNDHRSSSPSHRRKRRKPAG
VGNLFDIEAEVDDEDEDEADDRDGEEIEDFIDNAHPDDIADSGGMNDDRRHRDLDRRREL
EASLDAEKQAEILRERYGKRAPTRGYSDMAIVPKRLLLPSVNDPGIWAVRCKEGKEREVV
FSIIRRVEERLGTKNELPITAAFERAGPNSVMKGYVYIEALRQNDILLSLDGILNVYPRT
KMDLVPIKDMPDLLRVIKTPSLTPGAWVRMKRPAKHAGDLAQVLDVTENGLEARVRFIPR
LDYGVREDGIGPDGKRKRPGIPGPRPPQRLFSEAEARKKNPRHLQGNPQTNSWTFMGDEF
ENGFQVKDIKIQLLDVKDVNPTLEEVTRFAGGSEDGTENLDLKALAASLKDSSSNVAYVP
GDVIEVYEGEQRGVVGKAVDVRGDIVTLRVTEGNLAGQTIEVPNKGLRKLFKIGDHVKVI
GGSRFRDEVGMVVNISQDRVTLLTDQTNNEVTVFSKDLRAASDIGGQGSLGQYSLLDLVQ
LDATTVGCIVKVDRESVGVLDQNGEVRQVMPSQITNKLPKRRTAVAADRSGSEIRLDDVV
REYGGQQRQGKIIHIHRSFIFLHTNTTNENAGVFVTRAGNVNTIAAKGGRINSGGGPDLT
AMNPAMKRSPAENNRMAAPKSFGPDRAINQTVTIRRGGYKGLLGIVKDTTDTHARVELHT
KSKIITVPKADLAFKDKVTGKPIDIYSRGGRGGGGFGGSGRGGFGGGGGGGGRGDWPGGR
TPMASGAGGRTPAWGGASSSSRTPAWSSNASGARTPAWQDGSRTANPYDGNRTAYGGATA
YGGSGGRTPAWNSGSKTPAHDGFGHGSKTPAYGGSGSGDTWGSKTPAYGGGLSAPTPAAS
GGADWGYTPGASGNSYDAPTPGAGLSAPTPGAFSAPTPGAYTAPTPAPISAPTPGVWAGG
WGGDTAPTPAATAPTPGASGSGYYGAPTPAPFTAETPAASGGYDDDD
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaccactacggaggcgactccgagtcagaagacgacaacttcaacccggcc
ccagccgacctgtcggatgaggaacaggatgccaacgacagcagtccccgcgtgtcccgt
aagaacgaccatcgcagtagcagcccgagccaccgcaggaaacgtcgcaagcctgccggt
gtgggcaatctgttcgatatcgaagccgaggtcgacgatgaagacgaagacgaagccgac
gacagagatggcgaggagatcgaggacttcatcgacaatgcccaccctgacgatatcgcc
gacagcggcggcatgaacgacgacaggagacatcgtgacctcgaccggagacgcgagctg
gaggccagcctcgacgccgaaaagcaagccgagatcctgcgtgagcgttatggcaaacgt
gcgcccaccagaggatacagtgacatggccattgtgcccaagcgcctgcttcttcccagc
gtcaatgaccccggcatctgggccgttaggtgcaaggaaggcaaggagcgcgaggttgtc
ttctccatcatccgccgtgttgaggagagacttggtaccaagaatgagctgcccatcact
gctgcctttgagcgtgccgggcccaattccgtcatgaagggttacgtttacatcgaggcg
ctccgccaaaacgacatcctgctctctttggacggcattctcaacgtgtaccctcgcacc
aagatggatctggttccgatcaaggacatgcccgatctcttgcgcgtcatcaagaccccg
agcctgacacctggtgcctgggtgcgcatgaaaaggcctgcgaagcacgctggagatctc
gcccaggttctcgacgtcaccgagaatggactggaagctagagttaggttcattccccgt
ctggactatggtgtaagagaggatggcatcggtccagatggcaagcgcaagcgtcccggc
atccctggaccccgcccaccccagcggctcttcagcgaagccgaggccaggaaaaagaac
ccacgacatctccagggcaacccacagacgaactcgtggacatttatgggtgacgagttt
gagaatgggttccaagtcaaagatatcaagattcagctgctcgatgtcaaggatgtaaac
cccacgctcgaagaggtcacacggttcgccggtggttccgaggatggcacagagaacctt
gacctcaaggctcttgctgccagcttgaaagacagcagctccaacgttgcttatgtcccc
ggagatgtgatcgaagtgtacgagggcgaacagcgcggagtggttggcaaagccgtcgat
gttcgcggtgacatagtgacactcagagtcacggaaggaaacctcgctgggcagaccatc
gaggtgcccaacaaaggtcttcgcaagctgttcaagattggtgaccacgtcaaggtcatc
ggcggcagccgtttccgtgacgaggtgggcatggtggtcaacatctcgcaggatcgtgtc
accctgctcacggatcagaccaacaacgaggtcacagtattcagcaaggacctccgcgcc
gccagtgatattggaggacagggatcgcttggccagtactccctccttgatctggtgcag
ctggatgcgacgactgttggctgcatcgtcaaggttgaccgtgagtcagtgggggtgctt
gaccagaatggagaggtgaggcaggttatgccttctcagattaccaacaagctcccaaag
aggagaactgccgtggctgctgacaggagcggctccgagattcgtctggatgatgttgtc
cgtgagtacggtggtcaacaacggcagggtaaaatcattcacattcatcgctctttcatc
ttcttacacaccaacacgaccaacgagaatgccggcgtttttgtcacgcgcgccggcaac
gtcaacaccatcgcggccaagggtggtcgcatcaacagcggcggtggtcctgacttgact
gccatgaacccggccatgaagcgaagccctgccgagaacaaccgcatggctgcaccaaag
agcttcggtccggaccgtgccatcaaccagactgtcactatcaggaggggtggatacaag
ggtttgctgggtatcgtcaaggataccacggatacccatgcgcgtgttgagctccacacc
aagagcaagattattaccgtgccaaaggcggaccttgccttcaaggacaaggtcactggt
aagccaattgacatctactcccgtggcggacgcggtgggggcgggtttggtggttctgga
cgtggtgggtttggtggtggtggtggtggtggtggtagaggagactggcccggtggtaga
accccaatggcttctggggccggcggccgtaccccagcttggggcggtgcatcatcttcc
tctcgtacacctgcctggagcagcaatgcctctggcgcacgaacacctgcgtggcaagac
ggctctcggactgccaacccatacgacggcaaccggactgcctatggaggcgccacggct
tacggcggcagcggcgggcgcaccccggcgtggaactctggctccaagacacctgcccat
gacggctttggccacggatccaagacacccgcctacggtggaagcggcagcggcgacacc
tggggctccaagactcctgcttatggcggcggtctttcggcaccaacccctgctgcgagt
ggcggtgccgactggggatacactcccggagccagcggcaactcgtacgacgcgcccacg
cccggcgccggtctcagtgcgcccacgccgggagcgttcagtgctccgactccgggcgcc
tacacggcaccaacgccggcacccatcagcgctcccactccgggcgtgtgggcaggtgga
tggggtggggacacagcgccaacacctgctgccactgcgcccactcctggtgcctccggc
tcgggatactatggtgctccgacgccggcccccttcacggcggagacgcctgctgccagc
gggggttatgacgatgatgactag
DBGET
integrated database retrieval system
