Podospora anserina: PODANSg2093
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Entry
PODANSg2093 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pan
Podospora anserina
Pathway
pan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PODANSg2093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pan03041
]
PODANSg2093
Enzymes [BR:
pan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PODANSg2093
Spliceosome [BR:
pan03041
]
Complex C
Other components
Step II factors
PODANSg2093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
SRP54
nSTAND3
SLFN-g3_helicase
ResIII
AAA_30
ATPase
T2SSE
Flavi_DEAD
AAA_16
ABC_tran
PhoH
NACHT
AAA_7
Motif
Other DBs
NCBI-GeneID:
6189287
NCBI-ProteinID:
XP_001905071
UniProt:
B2ALR6
LinkDB
All DBs
Position
1
AA seq
998 aa
AA seq
DB search
MGRDYEDDRSNKRRKLDFNPLRNDDRFSDIPSRPQNRFNSRSSTPRAGSKLAGASTPKQR
EFDGPEEGVDDQDAINALDRDWYGGDDDLGGHTFGDDTHNPFGDEAGWAAQEREAALIEK
KVANFSRGGMNARQLQKQKDVDAWETNRMLTSGVAQRRNMGRDFEDDQEGTRVHLLVHDL
RPPFLDGRTVFTKQLEPIPAVRDAQSDMAVFSRKGSRVVKERRTQRERAKQAQEATNVAG
TALGNLMGVKEEDTDSALPIASEESGKAQNSNKFSEHMKKSEGASNFSQSKSLKEQREYL
PAFAVREDLLRVIRDNQVVIVVGETGSGKTTQLAQFLYEDGYGKVGMIGCTQPRRVAAMS
VAKRVAEEMEVKLGSTVGYAIRFEDCTSKETVIKYMTDGVLLRESLNEPDLDRYSCVIMD
EAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNSKRFSDFYGGAPEFTIPGRTFPVD
VMFHRSPVEDYVDAAVQQVLAIHVGKPAGDILVFMTGQEDIEVTCELVRERLDALNDPPK
LSILPIYSQMPADLQAKIFDRAAPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYN
PRMGMDTLQITPISQANASQRSGRAGRTGPGQAYRLFTEKAFKDEMYISTIPEIQRTNLS
NTVLLLKSLGVKDLLDFDFMDPPPQDTITTSLFDLWALGALDNLGELTDLGRKMNAFPMD
PSLAKLLIMSEQYGCSEEMVTIVSMLSVPNVFFRPKERQEESDAAREKFFVPESDHLTYL
HVYTQWKANGYSDRWCVQHFLHSKSLRRAKEVRDQLLDIMKMQQMEMVSCGTDWDVIRKC
ICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGFLPDYVIYHELILTSKEYMST
VTSVDPHWLAELGGVFYSVKEKGYSAREKRITETEFNKKMEIEAQMAADKKRHEEEVQAE
EELKLVKKAGPAGKSKDKKTVTSGAVVKPVRKRAGRGF
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgactacgaagatgaccgctcgaacaagcggaggaagctggacttcaaccca
ctgcgcaacgacgatcgattcagcgacatcccatcccgcccccaaaaccgcttcaactcg
agaagctctacaccgcgcgccggctcaaaattggctggcgcatccacaccaaagcaacga
gagtttgacggcccagaagagggcgtcgacgaccaagatgccatcaacgctctcgaccgc
gactggtatggtggtgacgatgacttgggtggacacacgtttggcgacgacacccataat
ccattcggcgatgaggcaggctgggcagcgcaggaaagggaggccgccttgatagagaaa
aaggtcgccaacttttcgcgcggcggcatgaacgcgcgacagttgcagaaacaaaaggat
gttgatgcgtgggagaccaacagaatgctcacatccggtgtggcgcaacgaagaaatatg
ggacgcgattttgaggacgaccaagaagggacccgcgttcatcttctcgtgcatgaccta
cgaccgccgttcttggacggacgaactgtctttacgaagcaattggagcccattcctgcc
gttcgagatgcccaaagtgatatggctgtcttcagcaggaaagggagtcgcgttgtgaag
gaaaggcgcacgcagagagaacgcgcaaaacaggctcaggaggcaacaaacgtggcagga
actgcgctgggtaacttgatgggggtgaaagaagaggacaccgacagcgcccttcccatc
gcgagtgaggaatctggaaaggcgcaaaactcaaacaaattcagcgaacatatgaagaag
tcggagggcgcaagcaacttcagtcaaagcaaatccctgaaagaacagcgggagtatctt
ccagcgtttgctgttcgcgaagatttgctgcgggtaattcgagacaaccaagtggtcatt
gtggtcggagaaacaggctctggcaaaacgacacagctggcccagtttctgtatgaagat
ggctacggcaaggttggtatgattgggtgcacacagccccgaagagtagcagcaatgagt
gttgccaaacgtgtggctgaggaaatggaagtaaaactcgggagtacagtgggctatgcg
attcgtttcgaggactgcaccagcaaagagacggttatcaagtacatgacagatggtgtg
ttgcttcgagaatctctgaatgagccggaccttgatcgatactcgtgcgtcatcatggat
gaagcccacgaaagagcgctcaataccgacgttctcatgggcttgttcaaaaagattctt
cagagacgccgcgatctgaaactgatcgtgacttcggccacgatgaactccaaacgcttc
tccgacttttacggcggagctcccgagttcacgatcccgggtcgaacattccccgttgat
gtcatgtttcaccggtcacctgttgaggactacgtggatgcggccgtgcagcaggtcctg
gcgattcatgtgggcaaaccagcaggcgatattctggtattcatgacgggccaggaagat
atcgaggtaacgtgtgagcttgtccgtgaacgcctggatgcgctcaacgatcctccaaag
ctcagcatcctccctatttacagtcaaatgccggcagatttgcaggccaaaattttcgac
cgagctgccccgggtgttcggaaatgtatcgtggccaccaacattgccgagaccagtttg
acggtcgatggtatcatgtatgtggttgacgcagggtactcgaagctcaaagtgtacaac
ccacgaatgggtatggacacgctacaaatcacccccatctcgcaagcaaacgcatcgcag
cgttccggtcgtgccgggcgaaccggccccggacaggcctaccgtcttttcaccgaaaag
gccttcaaagacgagatgtacatctccacaatccccgagattcaaagaaccaacctgagc
aacacagtcttgctcctcaagtccctcggcgtcaaagacctgctcgactttgactttatg
gaccccccaccccaagacaccatcacgacctccttgttcgacctgtgggcgctgggagcc
ctggacaacctcggcgagctgaccgacctgggacggaagatgaacgccttccccatggac
ccctccctcgccaaacttctgatcatgtcggagcaatatggctgcagcgaagagatggtc
accatcgtctcgatgctctccgtccccaacgtcttcttccgacctaaagaacgccaggag
gaatccgacgccgcacgggagaagttcttcgtgccagagtcagaccacctgacctatctc
cacgtctacacgcagtggaaagcaaacgggtacagcgaccggtggtgcgtccagcacttt
ttgcactccaagtccctccgccgcgcgaaagaggtccgggaccagctgctggatatcatg
aagatgcagcagatggaaatggtgagctgcgggacggactgggacgtgatccgaaagtgc
atctgctcggggtattaccatcaggcggccaaagtcaagggcataggcgagtacattaat
ttgcgaacgtcggtgacggttcagctccacccgacgagcgcgctttatgggctgggtttc
ttgccggattatgtcatttatcatgagctgatcctgacgtcgaaggagtacatgtctacg
gtcacgtcggtggaccctcactggctggccgagctgggcggggtgttttattcggtcaag
gagaaggggtattcggctagggagaagaggatcacggagaccgagtttaacaagaagatg
gagattgaggcgcagatggcggcggataagaagaggcatgaggaggaggtgcaggccgag
gaggagctgaagctggtgaagaaggctggtccggcggggaagagtaaagataaaaagacg
gtcacgtcgggggcggtggtgaagcccgtgaggaagagggctgggagggggttttga
DBGET
integrated database retrieval system
