KEGG   Podospora anserina: PODANSg2139
Entry
PODANSg2139       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pan  Podospora anserina
Pathway
pan03020  RNA polymerase
pan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PODANSg2139
  09124 Replication and repair
   03420 Nucleotide excision repair
    PODANSg2139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pan03021]
    PODANSg2139
   03400 DNA repair and recombination proteins [BR:pan03400]
    PODANSg2139
Transcription machinery [BR:pan03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PODANSg2139
DNA repair and recombination proteins [BR:pan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PODANSg2139
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF2489
Other DBs
NCBI-GeneID: 6189183
NCBI-ProteinID: XP_001905117
UniProt: B2AM36
LinkDB
Position
1
AA seq 220 aa
QVIKEEPREPTRSLHPLCSQHTIGSFILRATTSFHVRKQGQIDQVHPFTYHPYWRYRLGS
TFANQRSRITDSTMSDQKHAPTSRAKPPPAGEEEAGAVLKLGEFQDVDTLTLSEASLVIN
ALMAKRKKDRKDRNETDALNQTLDYLDAFARFKAKENVEAVERLLSTHKELSKFERAQIV
PLGSLCCDTADECKTLIPSLADKISDEDLGELLDELEKLL
NT seq 663 nt   +upstreamnt  +downstreamnt
caagtgatcaaagaagaaccaagagaacccaccaggtccctccatcctttgtgttcgcag
catacaatcggttcctttattcttcgtgcgaccactagtttccacgtccgcaagcaaggc
caaatcgaccaagtccatccttttacttaccacccatactggcggtacagacttggatct
acctttgccaatcaacgcagccgaataacagactcaacaatgtcggatcagaaacacgct
cctacctcgcgggcaaaacccccaccggccggtgaagaagaagcaggcgctgttctcaaa
ctgggcgagttccaggacgtcgacacgctgacactgtcggaagcgtcactcgtcatcaac
gccctcatggccaaacgaaaaaaggatcgcaaggaccggaacgagacggacgcgctcaac
cagacactcgactacctcgatgcatttgctcggttcaaggcgaaggagaatgtggaggct
gtcgagcggctgctgagcacgcacaaggaattgagcaaattcgaaagggcccagattgtc
cctctaggatccctttgctgcgataccgccgatgagtgcaagaccttgattccttccttg
gcggacaaaatcagcgacgaggacttgggagagctgctggatgaattggagaagcttctg
tga

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