Podospora anserina: PODANSg3173
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Entry
PODANSg3173 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pan
Podospora anserina
Pathway
pan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PODANSg3173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pan03019
]
PODANSg3173
Messenger RNA biogenesis [BR:
pan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PODANSg3173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
6190319
NCBI-ProteinID:
XP_001906145
UniProt:
B2ARN3
LinkDB
All DBs
Position
4
AA seq
437 aa
AA seq
DB search
MHPPPSSNPARQETPIFNHPSNQASTQPHKPPTDKHPAHDKETNIPILSAISTISHRATA
TCYLPPSSSASLATPAQSRASTADKMMPNPHVYGHHQYPQADSAWMHQQTSHQHHVQAAA
QGAVNVAQQQYHNRLAGAHNGVNALAQSHAQESSLDASVSEDNRRTLQYIADLLDENTRE
AALLELSKKREQVPELALILWHSFVTLGVMTSLLQEIISVYSLLNPSQLTAAASNRVCNA
LALLQCVASHNETRTLFLSAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSTE
VINFLLTTEIIPLCLRIMETGSELSKTVAIFIVQKILLDDNGLNYICATYERFYAVGTVL
SNMVGQLVEQQTARLLKHVVRCFLRAREALRQCLPEPLRDNTFAAVLRDDAATKRCLHQL
VVNLQENVVEPSGQLGI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctccacccagcagcaaccctgcccgacaagaaactcccatctttaaccacccc
tccaaccaagcttccactcaaccacacaaaccaccgaccgacaagcacccagctcatgac
aaagaaaccaacatacctatcttgtctgctatctccacaatttcacatcgcgcaaccgct
acctgctacctacccccgtcttcatctgcctctctcgctacgccggcacaatcacgcgct
tccaccgccgacaagatgatgcccaacccgcacgtatatggccaccaccagtatccccag
gcggactcggcctggatgcaccagcagacatcgcaccagcaccacgtccaggccgctgct
cagggtgctgtgaatgtggcccagcagcaatatcacaaccgcctggctggcgctcacaat
ggcgtcaatgccctggcgcagagccacgcgcaggagagctcgttggatgcgtccgtctcg
gaggacaatagacggacactgcagtacatcgccgatctgcttgatgagaacacgcgcgag
gcggccttgttggagctcagcaagaagcgggaacaggtacccgagttggcacttatcttg
tggcactcgtttgtgacattaggcgtcatgacctcgctccttcaagagatcatcagcgtg
tacagcttgttgaacccatcgcaactcactgcggcggcttccaacagagtgtgcaacgcg
ctggctctcctccagtgtgttgcgtcgcacaacgagacacgcacattgttcctaagcgct
catattcctcttttcctgtatccattcctcaacacaacctccaagtctaggccgttcgaa
tacttgcggctcacgtcgttgggagtgattggtgcgctggttaagaatgactcgactgag
gtgatcaacttcctgttgaccaccgagatcattcctctgtgtcttcgcatcatggagacg
gggtccgagctcagcaagacggtggcgattttcattgtccagaagattctgctcgacgac
aacggcctcaactatatttgcgccacatacgagcgattctatgcggtcgggacagtgttg
agcaacatggtgggccagcttgtcgaacagcaaacggctaggctcctgaagcatgttgtg
cgatgcttccttagagcccgtgaggcgttgcgtcagtgcctcccagagcctctgcgagac
aacacttttgccgccgtccttcgggatgacgccgcaacaaagcgttgtctgcaccagctc
gttgtcaaccttcaggaaaatgtagtcgaacccagcggccaacttggaatctga
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