Podospora anserina: PODANSg4781
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Entry
PODANSg4781 CDS
T01048
Name
(RefSeq) hypothetical protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
pan
Podospora anserina
Brite
KEGG Orthology (KO) [BR:
pan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pan03041
]
PODANSg4781
03009 Ribosome biogenesis [BR:
pan03009
]
PODANSg4781
Enzymes [BR:
pan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PODANSg4781
Spliceosome [BR:
pan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PODANSg4781
Ribosome biogenesis [BR:
pan03009
]
Eukaryotic type
Pre-60S particles
Helicases
PODANSg4781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
6191824
NCBI-ProteinID:
XP_001907746
UniProt:
B2AVJ5
LinkDB
All DBs
Position
7
AA seq
798 aa
AA seq
DB search
MAPVQKKRKTVDDDFILTISDNEEIPNEEEDVEVAAAAARPKKKTKTVKKEKKGKKGKKQ
QRQEGEDEEEEEGKDDKEAVWDDGAMDSDFEFALEGVNDFGEEFDGAWGFDDAKKNMLKG
GENKVMVDLDAIIERRRAKKEAKAGKKKEEVKEEEVEEEDEEMAEVDLDDDDDEVLAEDG
FGMGVGSDVEEEEEEEPKDGSDSEDEDEEKDGEADDDDDAASDNDSVATPINHPDDEKDS
ESEDDEEDAEEAAKRKEFFADEDDVKQEKGVHSSFLEMSLSRPILKGLNSVGFTKPTPIQ
SKTIPIALMGKDVVGGAVTGSGKTGAFLVPILERLLYRSKKVATTRVVILAPTRELAIQC
HAVGVKLASHTDIKFCLAVGGLSLKVQEQELRLRPDVVIATPGRFIDHMRNSASFAVETV
EILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIQV
DSQKKTASNLRQEFVRLRPGREKKRMGYLVHICKTLYTERVIIFFRQKKIAHETRIIFGL
LGMSCAELHGSMNQAQRIASVEAFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQNLE
IYIHRIGRTARAGRSGVALTLAAEPDRKVVKAAVRAGKAQGAKITSRIIEASDADKWQDQ
IDEMEGEIKEIMQEEKEEKQLQQVEMQVKKGENMIKYEEEIASRPKRTWFETQDDKRAAK
LAGREELNGIREQLKKKSQGKLSNKDKKKLDAKQEMKEGRTWKKGKEERAGKGAVLNLSK
VKKPKTKGPAGKKSFKRR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgttcaaaagaagagaaaaaccgtcgacgacgacttcatcctcaccatctcc
gacaatgaggaaatcccaaacgaggaggaggacgtcgaggttgccgccgccgccgctcgg
ccaaaaaagaagaccaagactgtgaagaaggagaagaagggcaagaaggggaagaagcaa
caacgacaggagggggaggatgaggaagaagaggaggggaaggacgacaaggaggctgtt
tgggatgatggcgctatggattccgactttgagtttgcgctcgaaggtgtgaacgacttt
ggggaagaattcgacggcgcgtggggttttgacgatgcgaagaagaatatgctcaagggg
ggcgagaataaggttatggttgatttggatgctatcattgagaggaggagggcgaagaag
gaggccaaggctgggaagaagaaggaggaggtgaaggaggaggaagtggaagaagaggat
gaggagatggcggaagtggaccttgacgacgacgatgatgaggtgttggcggaggatggc
tttggtatgggcgtggggtctgatgtcgaggaggaggaggaggaggagccaaaagacggt
tccgattctgaggatgaggacgaggagaaggatggcgaggccgacgacgacgacgatgct
gcttcggacaatgactcggtcgcgacacccatcaatcaccccgacgacgagaaagactcc
gaatccgaagacgatgaagaagatgccgaggaggctgctaagaggaaagagttctttgcc
gatgaggacgacgtcaagcaagaaaagggcgtccacagttccttcctcgagatgtcgctt
tcccgtcctattctcaagggtctgaactcggtcggattcacaaagcccacgccaattcag
tccaagacaataccaatcgcactcatgggcaaggatgttgtcggtggtgccgtgactggt
tccggtaaaacgggtgccttcctcgtacccattctcgagcgtctcctctaccggtcaaag
aaggttgcgacaaccagagtcgtcattttggcgccaacgcgtgagttggccattcagtgc
cacgctgtcggtgtcaagctggcatcgcacacagacatcaagttctgtctggctgttggt
ggtcttagtttgaaggttcaagaacaggagctgcgcctgagacctgatgtggtcatcgcc
acccctggtcgtttcattgatcatatgcgcaactctgccagctttgctgttgagactgtc
gagattctggtgcttgatgaggccgacagaatgctcgaagacgggttcgcggatgaactg
aacgaaattctcaccaccctccccaagtcgaggcaaacgatgctcttctcggccaccatg
acatcgtccgttgacaggctcattcgtgccggtctcaacaagcctgtccgcatccaggtt
gattctcaaaagaagactgccagcaacctcagacaagagtttgtgcggttgcggccgggc
cgtgagaagaagcgtatgggatacctggtacacatttgcaagaccctttacacagaacgc
gtcattattttcttcaggcaaaagaagattgcgcacgagactcgcatcatctttggtctt
ttaggcatgagctgcgcagagcttcacggcagcatgaaccaagcacagcgtattgctagt
gttgaagcattcagagacggcaaggtcaatttccttttagctacagatttggcctctcgt
ggtttggatatcaagggtgttgacactgtcatcaactacgaggcccctcaaaacttggaa
atctacatccatcgtatcggtcgtactgcccgtgcgggccgtagcggtgttgccctcacg
ctggcagccgagcccgaccgcaaggttgtcaaggcggctgtcagggccggcaaggctcag
ggcgcaaagattaccagcagaatcatcgaggcatctgatgccgacaagtggcaagatcag
attgacgagatggagggcgagatcaaggagatcatgcaggaagagaaggaggagaagcaa
cttcaacaagtggagatgcaggtcaagaagggtgagaacatgatcaagtacgaagaggag
atcgcctcgcgacccaagcgtacatggttcgagacccaggatgacaagagagccgccaaa
cttgcgggccgcgaagagctcaacggcataagggaacagctcaagaagaagagccaaggc
aagctgagcaacaaggataagaagaagctcgatgccaagcaagaaatgaaggaaggcagg
acatggaagaagggcaaggaagagagagctggaaagggggcggtcctgaacctttccaag
gtgaagaagcccaagacgaaggggccggctggcaagaagtcgttcaagaggaggtag
DBGET
integrated database retrieval system
