KEGG   Podospora anserina: PODANSg5511
Entry
PODANSg5511       CDS       T01048                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
pan  Podospora anserina
Pathway
pan03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pan00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PODANSg5511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pan03019]
    PODANSg5511
   03036 Chromosome and associated proteins [BR:pan03036]
    PODANSg5511
Messenger RNA biogenesis [BR:pan03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PODANSg5511
Chromosome and associated proteins [BR:pan03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     PODANSg5511
    COMPASS/SET1 complex (yeast)
     PODANSg5511
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 6192016
NCBI-ProteinID: XP_001908476
UniProt: B2AXM5
LinkDB
Position
7
AA seq 372 aa
MAPVPMDLDDASPALRGLGGVNGPPTAPVTEVIANFRPTKLFNREDIEDNKSNPYILSID
FDDPGELCMTSESDRTIQIYNVKEGRHDKMLISKKYGVKLAKFTHTSSSVIYASTRENDA
IRYLATHDSSFIRYFDGHEGAVTCLAMHPGTDNFISCSLDNTVRLWNTQTKNWTGTLYLN
TPYLSAWDPSGQVFAVASPSSGSILLYDYRNYHKAPFSTFDLVKARGPADPEMAFRGWTK
LEFSNDGKHILLGSRGNGHFLLDSFDGSLKAFLRKPNGGTKRLAAGENDGGHVESSGECC
FTPDGRYVLSGGKSDLLIWDTLMTPDSKQVLEPAHILEEKREAAVVAYNPRYNMIATADQ
ELLFWLPDPPNS
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcgcccgtaccgatggacctcgacgacgcgtctcctgccttgcggggtttaggtggt
gtgaatggccctcccactgcaccagtcaccgaggtgattgcaaacttcaggccaaccaag
ctgttcaatcgtgaagacatcgaggacaacaagtcgaatccttacattctctcgatcgat
ttcgacgacccgggtgagctttgcatgacctctgagagcgataggacgattcagatctac
aatgtcaaagagggtcgacatgacaagatgctcatcagcaagaagtatggtgtgaagctt
gccaagttcacccacacaagttcaagtgtcatttacgccagtactcgcgaaaatgacgcg
atcagatatctcgcaacccacgacagctccttcatccgctactttgacggccacgaaggc
gccgtgacctgtctcgccatgcacccgggcaccgacaactttatctcctgcagccttgac
aacacggttaggttatggaacacccaaaccaagaactggactggtacactctatctcaac
accccctacctgtcggcgtgggacccgtcgggccaggtgttcgcggttgctagtcctagc
agcggaagcattctcctctacgactatcgcaactaccataaagcgccgttctcgacgttc
gacctcgtcaaagccagagggcccgccgatccagaaatggcttttaggggatggacgaag
ctggagttctccaacgacgggaagcacatccttcttgggtcgcgaggcaacggccatttc
ctgctggactcgtttgacggcagcctcaaagccttcctcaggaagccgaacggtggtaca
aaacggcttgccgccggcgagaacgacggcggacacgtggaaagcagcggcgagtgctgc
ttcacccctgacggtcgttatgtcttgagcggtggaaaatcagacttgttgatctgggac
acgctcatgacaccagactcgaagcaagtcttggagccggcgcatattttggaagagaag
agagaggcagccgtggtggcgtacaacccgcggtacaacatgattgcgacggcagaccag
gagctgctgttttggcttccagacccccccaattcgtag

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